ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1286_curated_20

Organism: scnpilot_dereplicated_Devosia_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(16707..17063)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L18 n=1 Tax=Sphingomonas jaspsi RepID=I0IW42_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 72.7
  • Coverage: 110.0
  • Bit_score: 164
  • Evalue 7.90e-38
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.8
  • Coverage: 120.0
  • Bit_score: 185
  • Evalue 6.10e-44
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 similarity KEGG
DB: KEGG
  • Identity: 72.7
  • Coverage: 110.0
  • Bit_score: 160
  • Evalue 2.70e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia geojensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 357
ATGCCCATCACTGTCAAGGGATCGGAACGGCGCAAGGCGCGCGTTCGCAAAGCCATCAAGGCCCGTGCTTTCGGCCGGCCGCGTCTGAGCGTGCACCGCTCCGGCAAGAACATCTATGCCCAGGTCATCGACGACGCGTCCGGACGCACTCTCGCTTCCGCTTCGACGCTCGACAAGGATATCAAGGGCACCAATGGTGGTTCGACCGAGGGTGCCGCCGCTGTCGGCAAGCTCGTCGCCGAGCGCGCCAAGGCGGCCAATGTGTCCGAGGTCATCTTCGACCGCGGCGGTTACCTCTACCATGGCCGCGTGAAGGCCCTGGCGGATGCCGCCCGCGAAGGCGGCCTTTCGTTCTGA
PROTEIN sequence
Length: 119
MPITVKGSERRKARVRKAIKARAFGRPRLSVHRSGKNIYAQVIDDASGRTLASASTLDKDIKGTNGGSTEGAAAVGKLVAERAKAANVSEVIFDRGGYLYHGRVKALADAAREGGLSF*