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SCNpilot_expt_1000_bf_scaffold_1286_curated_21

Organism: scnpilot_dereplicated_Devosia_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(17078..17611)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC24_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 66.1
  • Coverage: 177.0
  • Bit_score: 245
  • Evalue 5.30e-62
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.4
  • Coverage: 177.0
  • Bit_score: 283
  • Evalue 2.40e-73
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 177.0
  • Bit_score: 245
  • Evalue 1.70e-62

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Taxonomy

Devosia sp. LC5 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGTCCCGTACAGGCAAGAAGCCCATTGCACCGGTCAGCGGCGTCACCGTCGCGATCAACGACCGCGTTGTCACCGCCAAGGGTCCCAAGGGTGAGCAGTCGCTGACCCTGATGGATATCGTCAACGCCAAGCAGACCGATCAGGGCATCGTGATCGAGCCGGCCAACGACACCACCGAGGCCCGCGCCGCCTGGGGCACCACCCGCGCGCTGATCGCCAACATGGTGGACGGCGTGTCCAAGGGCTTCGAGAAGAAGCTGCAGATCCAGGGCGTTGGTTTCCGCGCCGCCATGCAGGGCAAGGATCTCAAGCTCTCCCTCGGCTTCAGCCACGAAGTCCTGTTCGAGACCCCCAAGGGGATCACCATCGCGACCCCGACCGCCACCGACGTCACCGTGACCGGTGCCGACAAGCAGCAGGTCGGCCAGGTTGCGGCCAACATCCGCGCCTTCCGCAAGCCCGAGCCCTACAAGGGCAAGGGTGTCCGTTACGCCGGCGAATTCGTCGCGCGTAAGGAAGGCAAGAAGAAGTAA
PROTEIN sequence
Length: 178
MSRTGKKPIAPVSGVTVAINDRVVTAKGPKGEQSLTLMDIVNAKQTDQGIVIEPANDTTEARAAWGTTRALIANMVDGVSKGFEKKLQIQGVGFRAAMQGKDLKLSLGFSHEVLFETPKGITIATPTATDVTVTGADKQQVGQVAANIRAFRKPEPYKGKGVRYAGEFVARKEGKKK*