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SCNpilot_expt_1000_bf_scaffold_587_curated_16

Organism: scnpilot_dereplicated_Devosia_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(11957..12667)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding response regulator ChvI n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA14_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 84.5
  • Coverage: 238.0
  • Bit_score: 396
  • Evalue 1.40e-107
Transcriptional regulator {ECO:0000313|EMBL:KFL32102.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 238.0
  • Bit_score: 433
  • Evalue 1.90e-118
DNA-binding response regulator ChvI; K14981 two-component system, OmpR family, response regulator ChvI similarity KEGG
DB: KEGG
  • Identity: 84.5
  • Coverage: 238.0
  • Bit_score: 396
  • Evalue 4.50e-108

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Taxonomy

Devosia riboflavina → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGCCTAAGATCGCCCTGGTGGACGATGACCGCAACATCCTCACCTCCGTGTCGCTGACGCTCGAGGCCGAGGGGTACAACGTTTCCACCTATACCGATGGTGCCTCGGGCCTTGAGGGGCTCACCTCGGACAAGCCCGACCTCGCCATTCTCGACATCAAGATGCCGCGCATGGACGGGATGGAGCTGCTCCGCCGCCTCCGCCAGAAGTCGGATCTGCCGGTGATCTTCCTCACGTCGAAGGACGAGGAGATCGACGAGCTGTTCGGCCTCAAAATGGGCGCCGACGACTTCATCAAGAAGCCGTTCAGCCAGCGCCTGCTGGTCGAGCGCGTCAAATCCATCCTTCGCCGTTCCGCCCCGCGCGACGGCCAGGCCGGCACCACCGCCGAGCCGCAGCCGGGCAAGGCGCTCATCGAGCGCGGCAATCTGGTGATGGATGAAGAACGCCACACCTGCACCTGGAAGGGCCAGCGTGTGACGCTGACCGTCACCGAGTTCCTGATCCTGCAGGCGCTCGCGCTCCGTCCGGGCGTCGTGAAATCGCGCAACGCGCTGATGGATGCCGCCTATGACGACCAGGTCTATGTGGACGACCGCACCATCGACAGCCACATCAAGCGGCTGCGCAAGAAGTTCAAGGCAGTCGACGACGAGTTCGAGATGATCGAAACGCTCTACGGCGTCGGCTACCGCTTCAAGGAACAATAA
PROTEIN sequence
Length: 237
MPKIALVDDDRNILTSVSLTLEAEGYNVSTYTDGASGLEGLTSDKPDLAILDIKMPRMDGMELLRRLRQKSDLPVIFLTSKDEEIDELFGLKMGADDFIKKPFSQRLLVERVKSILRRSAPRDGQAGTTAEPQPGKALIERGNLVMDEERHTCTWKGQRVTLTVTEFLILQALALRPGVVKSRNALMDAAYDDQVYVDDRTIDSHIKRLRKKFKAVDDEFEMIETLYGVGYRFKEQ*