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SCNpilot_expt_1000_bf_scaffold_145_curated_34

Organism: scnpilot_dereplicated_Devosia_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(30075..30812)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.3
  • Coverage: 245.0
  • Bit_score: 382
  • Evalue 5.40e-103
tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 65.7
  • Coverage: 245.0
  • Bit_score: 340
  • Evalue 5.20e-91
tRNA pseudouridine synthase A n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGC8_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 65.7
  • Coverage: 245.0
  • Bit_score: 340
  • Evalue 1.70e-90

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Taxonomy

Devosia sp. DDB001 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
GTGCCCCGCTACTGCATCAAGCTCGAGTATGATGGAACGCCGTTCGCCGGATGGCAGCGGCAGGCCGATGCGCTCAGCGTGCAGCAGGTTGTCGAAGAGGCCATCGAGAAGATGAGCGGCGAGACAGTCGCGATCCAGGCGGCAGGCCGCACCGATTCGGGCGTGCATGCGCTGGGGCAGGTCGTGAGCTTTGATCTGAGCCGCAAATGGGATGCGTTTCGCATCCGCGAGGCGCTCAACTTCCACACCAAGCCGCATCCGGTGGCGATCGTCGAGGCGGCGGCGGTGCCTGATAGCTTCGAGGCGCGCTTCTCCGCCATCGGCCGCCACTACGAATACCGCATCCTTAGCCGCCGCGGCCGGCCGGCGCTCGATGACCATCGCGTCTGGCACTGCCCGATGGCGCTCGATGCCGATGCCATGCACGCCGCCGCCCAGCTCATCCTGGGCAAGCACGACTTCACCACGTTCCGTGCCTCCGAGTGTCAGGCGAAATCCCCCGAGAAGACGCTCGACCGGCTCGATGTGAGCCGCGAAGGCGAGACGATCGTGGTGCGCGCCAGTGCCCGCAGCTTCCTCCACTCGCAGGTTCGCTCGATGGTAGGGTCGTTGAAGCTCGTGGGCGAGGGCAAGTGGACGCCGCGCGAGTTTCGCGCCGCCCTCGATGCGCGCGACCGCGCCCGCTGCGGTCCGCTGGCGCCGCCCGAGGGCCTCTACCTGGTGCGCGTGGACTACTGA
PROTEIN sequence
Length: 246
VPRYCIKLEYDGTPFAGWQRQADALSVQQVVEEAIEKMSGETVAIQAAGRTDSGVHALGQVVSFDLSRKWDAFRIREALNFHTKPHPVAIVEAAAVPDSFEARFSAIGRHYEYRILSRRGRPALDDHRVWHCPMALDADAMHAAAQLILGKHDFTTFRASECQAKSPEKTLDRLDVSREGETIVVRASARSFLHSQVRSMVGSLKLVGEGKWTPREFRAALDARDRARCGPLAPPEGLYLVRVDY*