ggKbase home page

SCNpilot_expt_1000_bf_scaffold_145_curated_36

Organism: scnpilot_dereplicated_Devosia_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(31814..32335)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.3
  • Coverage: 169.0
  • Bit_score: 272
  • Evalue 3.20e-70
peptide deformylase; K01462 peptide deformylase [EC:3.5.1.88] similarity KEGG
DB: KEGG
  • Identity: 69.2
  • Coverage: 172.0
  • Bit_score: 235
  • Evalue 9.80e-60
Peptide deformylase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGC6_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 69.2
  • Coverage: 172.0
  • Bit_score: 235
  • Evalue 3.10e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia limi → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 522
ATGGCGAAACGCGAAATCCTTGTGCTGCCCGATGCGCGCCTGCGGGCCATCGCCGAACCGATCGAAAAGGTCGACGCCGAGGTCAAAAAGCTCGCCAAGGACATGCTGGACACCATGTACGACGCGCCCGGCATCGGGCTCGCCGGCCCGCAGATCGGCGAAATGAAGCGCATCGTGGTGATGGACCTCGCCAAGGAAGGCGAAAAGCCCGACCCCATCGTGATGATCAACCCTGAGATCCTGAAGTACTCGGAGGAGACCATCACGTCGGAGGAGGGGTGCCTGTCGATCCCCGAGATCTATTACGATGTCGAGCGCCCGGCCGAGGTGACCGTGAAATACACCGACCTCGACGGCAACGAGGTCGAGCGCGAAGCCAAGGACCGGCTGGCGATCTGCATCCAGCATGAGCTCGATCACCTCGATGGCGTGCTCTATATCGACTACCTCAGCCGCCTGAAGCGCGACCGGGTGCTCAAGAAGTTCCAGAAGGCGGAGAAGCTCGCAAAGAAGGCGAGCTGA
PROTEIN sequence
Length: 174
MAKREILVLPDARLRAIAEPIEKVDAEVKKLAKDMLDTMYDAPGIGLAGPQIGEMKRIVVMDLAKEGEKPDPIVMINPEILKYSEETITSEEGCLSIPEIYYDVERPAEVTVKYTDLDGNEVEREAKDRLAICIQHELDHLDGVLYIDYLSRLKRDRVLKKFQKAEKLAKKAS*