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SCNpilot_expt_1000_bf_scaffold_321_curated_25

Organism: scnpilot_dereplicated_Devosia_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(23817..24605)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D023E4 related cluster n=1 Tax=unknown RepID=UPI0003D023E4 similarity UNIREF
DB: UNIREF100
  • Identity: 61.7
  • Coverage: 261.0
  • Bit_score: 337
  • Evalue 1.50e-89
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:KKB08419.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.8
  • Coverage: 262.0
  • Bit_score: 391
  • Evalue 9.40e-106
binding-protein-dependent transport system inner membrane protein; K02053 putative spermidine/putrescine transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 62.8
  • Coverage: 261.0
  • Bit_score: 336
  • Evalue 1.10e-89

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Taxonomy

Devosia geojensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 789
ATGAAGCAGAACCGCACCCTCGCCTGGATCGTGTTCGGGATCGGCGCCGCCTATTTCGTGCTGCCGCTGCTGGCGACGGTGCTGTTCTCGCTCAGCATCCGCAAATCGGGCTACACCCTCGACGCCTACGCCAATGTGTTCTCCGACCCACGCTTCCAGTCGACCTTCGGCTTCTCGCTGTGGATCGGCCTGTGCACAATCGTGGTCGGGCTCTCCATCGTCGTGCCTGCCGCCTACTATGTGCGCCTGCGCGCGCCGCATCTGCGGCCGGTCATCGAGTTCGTGACGCTGCTGCCGCTGATCATTCCGGCGATCGTGCTCGTGTTCGGCTATGTCCGCTTCTACAATTCGAGCTCGTGGCTGCCGCTGACCAACTCGAACTTCGGCACCGCGACGCTGCTCACCCTCGCCTACGTGGCGCTCGGCCTCCCCTACATGTACCGCGCGGTGGACACCGGGCTGCGCACCATCGACGTGCAGACGCTGACCGAGGCGGCGACCATCATGGGCGCCAACCAGTTCCAGGTGATTACCCAGGTGATCTTCCCCAACATCATCGTCGCGGTGCTGTCGGGTGCGTTCCTGACGCTGGCCATCGTCATCGGCGAGTTCACCATTGCGAGCCTGCTCGGCGTCCAGGTGTTCGGCGTCTATATGGAGAACATCGGCGCCAACCGGGCGTTCGAGCCGGCGGCGCTCTCGATCATCTCCTTCGTCCTCACCTGGGGCGCGATGGGCATGATCGCCTTCCTCGGCCGCTTCGCCCCCAAGACAGCCCCACGGACCTGA
PROTEIN sequence
Length: 263
MKQNRTLAWIVFGIGAAYFVLPLLATVLFSLSIRKSGYTLDAYANVFSDPRFQSTFGFSLWIGLCTIVVGLSIVVPAAYYVRLRAPHLRPVIEFVTLLPLIIPAIVLVFGYVRFYNSSSWLPLTNSNFGTATLLTLAYVALGLPYMYRAVDTGLRTIDVQTLTEAATIMGANQFQVITQVIFPNIIVAVLSGAFLTLAIVIGEFTIASLLGVQVFGVYMENIGANRAFEPAALSIISFVLTWGAMGMIAFLGRFAPKTAPRT*