ggKbase home page

SCNpilot_expt_1000_bf_scaffold_817_curated_20

Organism: scnpilot_dereplicated_Devosia_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 20211..21206

Top 3 Functional Annotations

Value Algorithm Source
Putative component of multidrug efflux system (RND family) n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EDI6_BRASB similarity UNIREF
DB: UNIREF100
  • Identity: 46.7
  • Coverage: 323.0
  • Bit_score: 284
  • Evalue 1.10e-73
Multidrug export protein AcrE {ECO:0000313|EMBL:CEJ11667.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.1
  • Coverage: 331.0
  • Bit_score: 287
  • Evalue 1.90e-74
RND family mulitdrug efflux protein similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 323.0
  • Bit_score: 284
  • Evalue 3.50e-74

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

bacterium YEK0313 → Bacteria

Sequences

DNA sequence
Length: 996
TTGGTTCGCGTCATCACCGTGGCGGTTCGCGATCACACCACGAGCGCTTCTCTGACCGGCGAAGTTCAAGCGCTGACGAAAATCGACCTCGCGTTTCGGGTTGCGGGGCAAATCAGCGAGCTCAACGTCACCGTCGGCCAGCACGTGACCGCCGGTCAGATCCTGGCACACATCGACTCCGAAGCGCAGCAGGCCGACCTCGAGCTTGCAAAGGCAAGCGTTCAGGCCGCCGAGGCGGCCCTCGAACAGGCCTCAGCGGCGCTGGCCCGCCAACAGGCGCTGCTGGCGAGCGGACTGGTAACACGAAGCAAATACGATCAGGCGGAACAAGACCGCCGCACCGCCGAGAGCTCATTAGTAGCGGCTCAAGCCATGCACCAGGCGGCCCTGAATGCGCTTTCCTACACGGAGCTTTTGGCCGACGGCGACGGCATCGTAACGCGCATCAATCGCGACAAGGGTGAAATCGCGGCATCGGCGCAACCGGTCATCTCTATCGCACATGACGGTCCGCGCGACGCCGTTTTCAACGTGCACGAGTCGCTGCTCTTTGCCGACGCCGAAGAGCTCCAGGCTGTACCGGTGGACATCGCGCTGGTCGCGGACGACAGTGTCCGAGCCATCGGCACCATACGGGAAGTCGCGCCAACGGTAGATCCTCGGTCGGGCACGGTTCGCGTCCGCGTCGCCCTGGAGAACGCCCCGCCCGCAATGAAGCTCGGCTCGCTCGTGACGGGAAGCGTAACTATGCCGATCTCGCACGCAATCGTGATCCCATGGAGCGCGATCACACTGGACCAGGGGCGGCCGGCTGTCTGGCTGGTGGAGCCCGAGGCACTGACAGCTACCGTGCGGCACGTCGAAATCAAGCAATACACTACGCCGGGCATTGTCCTTGCGGGCGGTCTGAAGGCGGGTGACTTGCTCGTCGTTGAAGGTGGTCAGTTTCTCTATGAAGGCAAGCCGGTCCGCATCGCCAGCGGAGACCCGGCATGA
PROTEIN sequence
Length: 332
LVRVITVAVRDHTTSASLTGEVQALTKIDLAFRVAGQISELNVTVGQHVTAGQILAHIDSEAQQADLELAKASVQAAEAALEQASAALARQQALLASGLVTRSKYDQAEQDRRTAESSLVAAQAMHQAALNALSYTELLADGDGIVTRINRDKGEIAASAQPVISIAHDGPRDAVFNVHESLLFADAEELQAVPVDIALVADDSVRAIGTIREVAPTVDPRSGTVRVRVALENAPPAMKLGSLVTGSVTMPISHAIVIPWSAITLDQGRPAVWLVEPEALTATVRHVEIKQYTTPGIVLAGGLKAGDLLVVEGGQFLYEGKPVRIASGDPA*