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SCNpilot_expt_1000_bf_scaffold_293_curated_20

Organism: scnpilot_dereplicated_Devosia_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(17124..17939)

Top 3 Functional Annotations

Value Algorithm Source
Putative transmembrane anti-sigma factor n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M4F0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 43.9
  • Coverage: 262.0
  • Bit_score: 203
  • Evalue 2.10e-49
Transmembrane regulator protein PrtR {ECO:0000313|EMBL:CDP50998.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.1
  • Coverage: 262.0
  • Bit_score: 272
  • Evalue 5.10e-70
putative transmembrane anti-sigma factor similarity KEGG
DB: KEGG
  • Identity: 42.1
  • Coverage: 261.0
  • Bit_score: 193
  • Evalue 8.70e-47

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Taxonomy

Devosia sp. DDB001 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 816
ATGACGCGCGAACACTTCGCGATCACCGCTGATGTGCTCCACGCCTATGCCGACGGCCAGCTGGGCGCGACCGAACGCGCCGCCGTCGAGCGCTATCTCGCTGCCCATCCCGATGCCGCCGCCGACGTCGCCGCCTGGCAGCGTCAGAACGAGGCGATGCACGCCCTGTTCCCCTCGGCGGCCAACGAGGCGGTTCCCGCCCGCCTGTCGCCGCACCGCATCGCCCGCGAGATCCGCAGTGCCCGCCGGCAAAGCATCATGAACATCGCCGCGGCGGTCACCCTCGTGGTCATCGGCAGCGGCATCGGCTGGTACGGCCGCGACTACCTGACGCCCACCAAGGCCGCGAGCGACTACCTCATCGAGGCCGCCGTCACCGCCCACAGCCTCTACGTCAAGGAAAAGACCCGCGCCGTCGAAGTCGGCGCCGACGCGCCCAATCTCATGACGTGGCTGTCCAACCGCATCACCACGCCCATCGACGCGCCCAACCTCACGGCCGAAGGCTACACCTTCCTCGGCGGGCGCCTGTTGCCCAGCGATCCGGGCAAGGGCATCCCCGGCCCCGCCGCCCAGCTCATGTACGAAAACGGCGAAGCGCAGCGCGTCACGCTCTACATCACCTCCGCCCTGCCCGACAAAGAGGAAGCCTGGCAGTTCGAGACCCTCAGCGGCGTCGAGGCCTATTACTGGGCCAACGACACGATCACCTGCACCGTCGTCGCCGCCCTCCCCGAAGCCGAGCTCCGCATGCTGGGCCGCAAGATCTTCGAGCAGCTCACCTGGCGCCCGGACGGTGCGGCGGTGCAGTGGTGA
PROTEIN sequence
Length: 272
MTREHFAITADVLHAYADGQLGATERAAVERYLAAHPDAAADVAAWQRQNEAMHALFPSAANEAVPARLSPHRIAREIRSARRQSIMNIAAAVTLVVIGSGIGWYGRDYLTPTKAASDYLIEAAVTAHSLYVKEKTRAVEVGADAPNLMTWLSNRITTPIDAPNLTAEGYTFLGGRLLPSDPGKGIPGPAAQLMYENGEAQRVTLYITSALPDKEEAWQFETLSGVEAYYWANDTITCTVVAALPEAELRMLGRKIFEQLTWRPDGAAVQW*