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SCNpilot_cont_1000_bf_scaffold_34_curated

Search features with annotation key words

Displaying items 331-342 of 342 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_34_curated_328
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(367629..368921)
-----------------
DNA (1293bp)
protein (431aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
histidinol dehydrogenase; K00013 histidinol dehydrogenase [EC:1.1.1.23]
Histidinol dehydrogenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9M1_PELHB
SCNpilot_cont_1000_bf_scaffold_34_curated_329
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(368921..369409)
-----------------
DNA (489bp)
protein (163aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9M0_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL28048.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_34_curated_330
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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370185..371840
-----------------
DNA (1656bp)
protein (552aa)
Maltodextrin glucosidase {ECO:0000313|EMBL:CDP52751.1}; EC=3.2.1.20 {ECO:0000313|EMBL:CDP52751.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
maltodextrin glucosidase; K01187 alpha-glucosidase [EC:3.2.1.20]
Maltodextrin glucosidase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAA4_PELHB
SCNpilot_cont_1000_bf_scaffold_34_curated_331
unknown

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comp(372018..372326)
-----------------
DNA (309bp)
protein (103aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_34_curated_332
unknown

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comp(372490..372786)
-----------------
DNA (297bp)
protein (99aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_34_curated_333
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(372783..373955)
-----------------
DNA (1173bp)
protein (391aa)
N-acetyl-L,L-diaminopimelate deacetylase; K01451 hippurate hydrolase [EC:3.5.1.32]
Amidohydrolase n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CDQ5_9RHOB
Amidohydrolase {ECO:0000313|EMBL:KKB06706.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
SCNpilot_cont_1000_bf_scaffold_34_curated_334
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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374085..375269
-----------------
DNA (1185bp)
protein (395aa)
Aspartate aminotransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAB2_PELHB
Aromatic amino acid aminotransferase {ECO:0000313|EMBL:KKC33219.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
aspartate aminotransferase
SCNpilot_cont_1000_bf_scaffold_34_curated_335
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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375298..375531
-----------------
DNA (234bp)
protein (78aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IFB5_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS66708.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_1000_bf_scaffold_34_curated_336
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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375937..376590
-----------------
DNA (654bp)
protein (218aa)
transaldolase; K00616 transaldolase [EC:2.2.1.2]
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
Probable transaldolase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAB3_PELHB
SCNpilot_cont_1000_bf_scaffold_34_curated_337
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

376597..377679
-----------------
DNA (1083bp)
protein (361aa)
Scaffold protein for (4Fe-4S) cluster assembly ApbC, MRP-like protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAB4_PELHB
Scaffold protein for [4Fe-4S] cluster assembly Apb C, MRP-like {ECO:0000313|EMBL:CDP52761.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Scaffold protein for (4Fe-4S) cluster assembly ApbC, MRP-like protein; K03593 ATP-binding protein involved in chromosome partitioning
SCNpilot_cont_1000_bf_scaffold_34_curated_338
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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377682..378119
-----------------
DNA (438bp)
protein (146aa)
GCN5-related N-acetyltransferase n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JWP3_STEMA
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AEM52139.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
SCNpilot_cont_1000_bf_scaffold_34_curated_339
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

378196..379509
-----------------
DNA (1314bp)
protein (438aa)
Beta-glucosidase {ECO:0000256|RuleBase:RU361175}; EC=3.2.1.21 {ECO:0000256|RuleBase:RU361175};; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
beta-glucosidase; K05350 beta-glucosidase [EC:3.2.1.21]
Beta-glucosidase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAB5_PELHB
Displaying items 331-342 of 342 in total

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