ggKbase home page

SCNpilot_cont_1000_bf_scaffold_9_curated_5

Organism: scnpilot_dereplicated_Devosia_4

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 4212..5825

Top 3 Functional Annotations

Value Algorithm Source
Signal recognition particle protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6Z9_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 69.8
  • Coverage: 540.0
  • Bit_score: 706
  • Evalue 2.50e-200
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.0
  • Coverage: 539.0
  • Bit_score: 825
  • Evalue 5.20e-236
signal recognition particle, subunit Ffh SRP54; K03106 signal recognition particle subunit SRP54 similarity KEGG
DB: KEGG
  • Identity: 69.8
  • Coverage: 540.0
  • Bit_score: 706
  • Evalue 7.90e-201

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia sp. 17-2-E-8 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1614
ATGTTCGATAGCCTCAGCGACCGGCTTGGGAAAATCTTCGAAGGCCTCACCGGCCGCGGCGCGCTGAACGAGGCGGATGTCGATGCGGCGTTGCGCGAAGTCCGCCGCGCGCTGCTCGAAGCCGACGTGTCGCTGGAAGTGGTCAAGGCCTTCGTCGAGCAGGTGCGCGAGCGCGCCGTCGGCGCCGAAGTCACCCGCTCGGTGACGCCCGGCCAGCAGGTGGTCAAGATCGTCCATGACGAATTGGTCAAGGTGCTGGGCGAGGTCCCGGTGCCGCTCGACTTCAACGCCCCGGCCCCGGTCGGCATGCTGATGGTGGGCCTGCAGGGCGCCGGCAAGACCACCCATGCCGGCAAGATCGCCAAGCGGCTGAAGGAGCGGCAGGGCAAGAAGGTGCTGCTGGCCTCGCTCGACGACCGCCGCCCTGCCGCCAAGGAGCAGCTGCGCGTGCTCGGCACCCAGATCGGCGTCGATACGCTGCCGATTCAGCAGGACGAGACGCCGGTCGACATTGCCCGCCGCGCCGAGCGCGAAGCCCGGATCGGCGGCTATGACGTCGTCATCTTCGATACCGCCGGCCGCACCCATGTCGACGAGGATCTGATGCAGGAGACCGCCGCGGTGAGGGCCGCGGTGAACCCCCACGAAGTCCTGCTGGTGGCCGATGCGCTGACCGGCCAGGACGCCGTCAACCTCGCCCGCTCCTTCGACCAGCGCGTCGACATCACCGGCATCGTCTTGACCCGCGTCGACGGCGACGGCCGTGGTGGTGCCGCGCTCTCGATGCGCGCCGCGACGGGCAAGCCGATCAAGCTGATCGGCACCGGCGAAAAGCTCGACGCGCTCGAGGATTTCCGTCCGGCCTCGATTGCCGACCGTATCCTCGGCATGGGCGACATCGTCAGCCTGGTCGAAAAGGCCAGCCAGACCATCAAGGCCGAAGACGCGGCCAGGATGGCCAAGAAGCTCAAGAAGGGCAGCTTCGACCTCGACGATCTGCGCGGCCAGTTGCAGCAGATGAAGAAGATGGGCGGCATGGGCGCCCTGATGGGATTGATGCCCGGCATGGGCCAGGTCAAGAAGGCCATGGCCGGCGCCAACATCGATGAGAAGGTGTTCGACCGGCAGATCGCCATCATCAACTCGATGACCAGAGCCGAGCGCGCCGACCCCGACCTGCTCAACGCCAAGCGCCGCATCCGCATCGCCAAGGGCTCGGGCACCAGGGTCGAAGACGTCAACAAGCTGATGAAACAGCACCGCCAGATGGCGGACATGATGAAGAAGGTTTCCAAGGGTGGCCTCGGCTCGCTGGCCGGCATGTTCGGCGGCAAGCTGGGCGGCATGATGCCCGGCCTCGGCCAGATGCCCGACCCGTCCAAGATGGACCCTGCACAGCTCGAAGCGATGGCCCGGCAGATGGGCATGGACCCCGCGATGCTGAAGCAGGCCACCACCGAGGGCGCTGCCCCGCCCAAGGACCTCGGCCAGAAGCTGCCCACCGATGTGGGCCAGTTGCTCAAATCCGGATCGGGCATGCCCGGTCTCGGCGGCGCCTCACGCTTCCCCGGCCTTCCCGGCCTCGGCGGCGGGTTCGTGCCGAAGAAGAAATAG
PROTEIN sequence
Length: 538
MFDSLSDRLGKIFEGLTGRGALNEADVDAALREVRRALLEADVSLEVVKAFVEQVRERAVGAEVTRSVTPGQQVVKIVHDELVKVLGEVPVPLDFNAPAPVGMLMVGLQGAGKTTHAGKIAKRLKERQGKKVLLASLDDRRPAAKEQLRVLGTQIGVDTLPIQQDETPVDIARRAEREARIGGYDVVIFDTAGRTHVDEDLMQETAAVRAAVNPHEVLLVADALTGQDAVNLARSFDQRVDITGIVLTRVDGDGRGGAALSMRAATGKPIKLIGTGEKLDALEDFRPASIADRILGMGDIVSLVEKASQTIKAEDAARMAKKLKKGSFDLDDLRGQLQQMKKMGGMGALMGLMPGMGQVKKAMAGANIDEKVFDRQIAIINSMTRAERADPDLLNAKRRIRIAKGSGTRVEDVNKLMKQHRQMADMMKKVSKGGLGSLAGMFGGKLGGMMPGLGQMPDPSKMDPAQLEAMARQMGMDPAMLKQATTEGAAPPKDLGQKLPTDVGQLLKSGSGMPGLGGASRFPGLPGLGGGFVPKKK*