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scnpilot_expt_750_p_scaffold_88_curated

Search features with annotation key words

Displaying items 1-30 of 228 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_88_curated_1
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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142..1365
DNA (1224bp) protein (408aa)
Putative uncharacterized protein n=2 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X585_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK04652.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
site-specific recombinase XerD
scnpilot_expt_750_p_scaffold_88_curated_2
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1362..2375
DNA (1014bp) protein (338aa)
Putative uncharacterized protein n=2 Tax=Dysgonomonas RepID=F8X586_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK04653.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
putative integrase/recombinase
scnpilot_expt_750_p_scaffold_88_curated_3
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2359..3369
DNA (1011bp) protein (337aa)
Putative uncharacterized protein n=2 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X587_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK04654.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
phage-specific recombinase/integrase XerD
scnpilot_expt_750_p_scaffold_88_curated_4
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3374..4423)
DNA (1050bp) protein (350aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J469_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGJ99484.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_88_curated_5
Bacteroides oleiciplenus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4427..4837)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Bacteroides oleiciplenus YIT 12058 RepID=K9ECV4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKU88767.1}; TaxID=742727 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides oleiciplenus YIT 12058.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_88_curated_6
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4843..5862)
DNA (1020bp) protein (340aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WYP4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK04376.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_88_curated_7
Bacteroides coprosuis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6484..6918
DNA (435bp) protein (145aa)
sos response umud protein; K03503 DNA polymerase V [EC:3.4.21.-]
Peptidase S24/S26A/S26B, conserved region n=2 Tax=Bacteroides coprosuis RepID=F3ZU23_9BACE
Peptidase S24/S26A/S26B, conserved region {ECO:0000313|EMBL:EGJ71124.1}; TaxID=679937 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprosuis DSM 18011.;"
scnpilot_expt_750_p_scaffold_88_curated_8
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6929..7666
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EBD4_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EDM37033.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
scnpilot_expt_750_p_scaffold_88_curated_9
Bacteroides coprosuis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7666..8916
DNA (1251bp) protein (417aa)
DNA-directed DNA polymerase {ECO:0000313|EMBL:EGJ71122.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EGJ71122.1};; TaxID=679937 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprosuis DSM 18011.;"
DNA-directed DNA polymerase n=1 Tax=Bacteroides coprosuis DSM 18011 RepID=F3ZU21_9BACE
putative RumB/ImpB like DNA repair protein; K03502 DNA polymerase V
scnpilot_expt_750_p_scaffold_88_curated_10
Pseudomonas sp. GM67, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8928..9215
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM67 RepID=J2U1Q8_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EJM80764.1}; TaxID=1144335 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM67.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_88_curated_11
Weeksella virosa, Weeksella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9224..9850
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Bacteroides propionicifaciens RepID=UPI0003814464
metal dependent phosphohydrolase; K06950 uncharacterized protein
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ADX67551.1}; TaxID=865938 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Weeksella.;" source="Weeksella virosa (strain ATCC 43766 / DSM 16922 / JCM 21250 / NBRC; 16016 / NCTC 11634 / CL345/78).;"
scnpilot_expt_750_p_scaffold_88_curated_12
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9915..10319
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0N155_9SPHI
Contig38, whole genome shotgun sequence {ECO:0000313|EMBL:KIO77349.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
NUDIX hydrolase
scnpilot_expt_750_p_scaffold_88_curated_13
Bacteroides coprosuis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10377..10742)
DNA (366bp) protein (122aa)
KilA-N, DNA-binding domain protein n=2 Tax=Bacteroides RepID=F3ZU19_9BACE
KilA-N, DNA-binding domain protein {ECO:0000313|EMBL:EGJ71120.1}; TaxID=679937 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprosuis DSM 18011.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_88_curated_14
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10735..10890)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis dnLKV3 RepID=R9HYL8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN16496.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_88_curated_15
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10892..11311)
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IXA7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02090.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_88_curated_16
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11325..12563)
DNA (1239bp) protein (413aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J2H8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK00138.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
transposase
scnpilot_expt_750_p_scaffold_88_curated_17
unknown

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13307..13726
DNA (420bp) protein (140aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_88_curated_18
unknown

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13820..14083
DNA (264bp) protein (88aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_88_curated_19
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

14177..15676
DNA (1500bp) protein (500aa)
Similar to cobalt-zinc-cadmium resistance protein CzcB id=1768113 bin=GWE2_Bacteroidetes_40_15 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
RND family efflux transporter MFP subunit
Tax=BJP_08E140C01_Bacteroidetes_41_49
scnpilot_expt_750_p_scaffold_88_curated_20
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

15689..18862
DNA (3174bp) protein (1058aa)
Cation efflux transporter id=4548954 bin=GWF2_Bacteroidetes_41_61 species=unknown genus=unknown taxon_order=unknown taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118
CzcA family heavy metal efflux pump
Tax=BJP_08E140C01_Bacteroidetes_41_49
scnpilot_expt_750_p_scaffold_88_curated_21
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

18843..20021
DNA (1179bp) protein (393aa)
Uncharacterized protein id=4548955 bin=GWF2_Bacteroidetes_41_61 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118
hypothetical protein
Tax=BJP_08E140C01_Bacteroidetes_41_49
scnpilot_expt_750_p_scaffold_88_curated_22
unknown

Not on your lists

20029..20472
DNA (444bp) protein (148aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_88_curated_23
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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20523..22394
DNA (1872bp) protein (624aa)
Copper/silver-translocating P-type ATPase n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KGI4_9FIRM
copper/silver-translocating P-type ATPase
Copper/silver-translocating P-type ATPase {ECO:0000313|EMBL:AGL02323.1}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
scnpilot_expt_750_p_scaffold_88_curated_24
Bacteroidales bacterium CF, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22733..23194
DNA (462bp) protein (154aa)
membrane protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D54ACC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGY54808.1}; TaxID=1400053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales.;" source="Bacteroidales bacterium CF.;"
scnpilot_expt_750_p_scaffold_88_curated_25
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23262..24107
DNA (846bp) protein (282aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J2J6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK00097.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
regulatory protein RteC-like protein
scnpilot_expt_750_p_scaffold_88_curated_26
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24460..24819
DNA (360bp) protein (120aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X460_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05106.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_88_curated_27
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24782..26830
DNA (2049bp) protein (683aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X459_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05105.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein rbh
scnpilot_expt_750_p_scaffold_88_curated_28
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26842..27144
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X458_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05104.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_88_curated_29
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(27282..27557)
DNA (276bp) protein (92aa)
hypothetical protein HKM-1_21054 id=2287295 bin=GWB2_Desulfobacterales_56_26 species=Halomonas sp. KM-1 genus=Halomonas taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=GWB2_Desulfobacterales_56_26_curated
scnpilot_expt_750_p_scaffold_88_curated_30
unknown

Not on your lists

27896..28153
DNA (258bp) protein (86aa)

This feature has no annotations

Displaying items 1-30 of 228 in total

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