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scnpilot_cont_500_p_scaffold_899_curated

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_899_curated_1
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..883)
DNA (882bp) protein (294aa)
N-6 DNA methylase; K03427 type I restriction enzyme M protein [EC:2.1.1.72]
N-6 DNA methylase n=110 Tax=Salmonella enterica I RepID=B5F4B3_SALA4
DNA methylase {ECO:0000313|EMBL:AJB61105.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
scnpilot_cont_500_p_scaffold_899_curated_2
Enterobacter sp. 35669, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1411..2418)
DNA (1008bp) protein (336aa)
Restriction endonuclease family protein n=2 Tax=Escherichia coli RepID=M9IGK8_ECOLX
Restriction endonuclease {ECO:0000313|EMBL:KJN35739.1}; TaxID=1619244 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 35669.;"
restriction endonuclease
scnpilot_cont_500_p_scaffold_899_curated_3
Raoultella ornithinolytica, Raoultella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2677..3018)
DNA (342bp) protein (114aa)
Toxin YkfI n=1 Tax=Klebsiella oxytoca MGH 28 RepID=V3NE65_KLEOX
Toxin {ECO:0000313|EMBL:KAJ94381.1}; TaxID=54291 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Raoultella.;" source="Raoultella ornithinolytica (Klebsiella ornithinolytica).;"
toxin
scnpilot_cont_500_p_scaffold_899_curated_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3039..3356)
DNA (318bp) protein (106aa)
CP4-6 prophage, antitoxin of the YkfI-YafW toxin-antitoxin system n=23 Tax=Enterobacteriaceae RepID=H9UNR5_ECOLX
yafW; CP4-6 prophage, antitoxin of the YkfI-YafW toxin-antitoxin system
Antitoxin YafW {ECO:0000313|EMBL:ESK02124.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
scnpilot_cont_500_p_scaffold_899_curated_5
Cronobacter sakazakii, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3375..3596)
DNA (222bp) protein (74aa)
YeeT n=1 Tax=Cronobacter sakazakii 680 RepID=K8D256_CROSK
Uncharacterized protein {ECO:0000313|EMBL:AKE95031.1}; TaxID=28141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter sakazakii (Enterobacter sakazakii).;"
ykfH; hypothetical protein
scnpilot_cont_500_p_scaffold_899_curated_6
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3605..4081)
DNA (477bp) protein (159aa)
Putative DNA repair protein n=1 Tax=Escherichia coli 541-15 RepID=I4S2M2_ECOLX
UPF0758 protein ykfG {ECO:0000313|EMBL:EWF64343.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
ykfG; CP4-6 prophage; putative DNA repair protein
scnpilot_cont_500_p_scaffold_899_curated_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4097..4555)
DNA (459bp) protein (153aa)
Phage antirestriction protein n=4 Tax=Escherichia coli RepID=L3TGP5_ECOLX
Intergenic-region protein {ECO:0000313|EMBL:KDX23086.1}; TaxID=1444231 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-156-04_S4_C2.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_899_curated_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4657..4896)
DNA (240bp) protein (80aa)
UPF0401 protein YkfF n=46 Tax=Enterobacteriaceae RepID=YKFF_ECOLI
ykfF; CP4-6 prophage protein
Uncharacterized protein {ECO:0000313|EMBL:ENG95487.1}; TaxID=1116067 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.3.;"
scnpilot_cont_500_p_scaffold_899_curated_9
Cronobacter malonaticus, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4973..5440)
DNA (468bp) protein (156aa)
YkfB n=1 Tax=Citrobacter freundii RepID=J7FPL7_CITFR
CFSAN001453_contig0030, whole genome shotgun sequence {ECO:0000313|EMBL:KIU61974.1}; TaxID=1128983 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter malonaticus ENBT0334.;"
ykfB; CP4-6 prophage; hypothetical protein
scnpilot_cont_500_p_scaffold_899_curated_10
Cronobacter sakazakii, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5464..5907)
DNA (444bp) protein (148aa)
Phage protein n=1 Tax=Escherichia coli KTE107 RepID=S1IJY1_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:AKE97280.1}; TaxID=28141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter sakazakii (Enterobacter sakazakii).;"
hypothetical protein
scnpilot_cont_500_p_scaffold_899_curated_11
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5897..6142)
DNA (246bp) protein (82aa)
Inner membrane protein n=3 Tax=Enterobacteriaceae RepID=M3DII5_CITFR
Putative inner membrane protein {ECO:0000313|EMBL:KFC96978.1}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
ypjK; CP4-57 prophage; putative inner membrane protein
scnpilot_cont_500_p_scaffold_899_curated_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6183..6884)
DNA (702bp) protein (234aa)
Phage transcriptional regulator n=3 Tax=Enterobacteriaceae RepID=L3ILM5_ECOLX
Phage transcriptional regulator {ECO:0000313|EMBL:ELD74751.1}; TaxID=1181778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE234.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_899_curated_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7101..7922)
DNA (822bp) protein (274aa)
Phage protein n=2 Tax=Escherichia coli RepID=L3IBJ8_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EOW11231.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
yafZ; CP4-6 prophage protein
scnpilot_cont_500_p_scaffold_899_curated_14
Enterobacter sp. 35730, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8014..8877)
DNA (864bp) protein (288aa)
Phage GTP-binding protein n=1 Tax=Escherichia coli KTE108 RepID=S1I8C0_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:KJM84880.1}; TaxID=1619247 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 35730.;"
ykfA; CP4-6 prophage; GTP-binding protein; K06946
scnpilot_cont_500_p_scaffold_899_curated_15
Enterobacter sp. 35730, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8999..9760)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. 30_2 RepID=T5LRP1_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJM84881.1}; TaxID=1619247 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 35730.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_899_curated_16
Enterobacter sp. 35730, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10049..10627
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Escherichia sp. TW11588 RepID=UPI0002BBCDD9
Uncharacterized protein {ECO:0000313|EMBL:KJM84882.1}; TaxID=1619247 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 35730.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_899_curated_17
Enterobacter sp. 35730, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10749..10955
DNA (207bp) protein (69aa)
Phage transcriptional regulator, AlpA n=4 Tax=Escherichia coli RepID=I4S2L1_ECOLX
Rha family transcriptional regulator {ECO:0000313|EMBL:KJM84883.1}; TaxID=1619247 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 35730.;"
Rha family transcriptional regulator
scnpilot_cont_500_p_scaffold_899_curated_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11230..14079
DNA (2850bp) protein (950aa)
Uncharacterized protein n=4 Tax=Escherichia coli RepID=T6XC55_ECOLX
Helicase, SNF2 family {ECO:0000313|EMBL:ABV18786.1}; TaxID=331111 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O139:H28 (strain E24377A / ETEC).;"
Helicase
scnpilot_cont_500_p_scaffold_899_curated_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14105..15085
DNA (981bp) protein (327aa)
Uncharacterized protein n=4 Tax=Escherichia coli RepID=T6XJZ1_ECOLX
ATPase
ATPase associated with various cellular activities family protein {ECO:0000313|EMBL:EHV55220.1}; TaxID=868160 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC6A.;"
scnpilot_cont_500_p_scaffold_899_curated_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15095..17482
DNA (2388bp) protein (796aa)
Uncharacterized protein n=4 Tax=Escherichia coli RepID=T6XZ69_ECOLX
serine protease
Serine protease {ECO:0000313|EMBL:AFS72833.1}; TaxID=1133852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O104:H4 (strain 2011C-3493).;"
scnpilot_cont_500_p_scaffold_899_curated_21
unknown

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18033..18284
DNA (252bp) protein (84aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_899_curated_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18524..19114
DNA (591bp) protein (197aa)
Uncharacterized protein n=4 Tax=Escherichia coli RepID=T6Y0T0_ECOLX
DNA methylase N-4/N-6
Adenine specific DNA methylase Mod {ECO:0000313|EMBL:EHV55223.1}; TaxID=868160 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC6A.;"
scnpilot_cont_500_p_scaffold_899_curated_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19111..21981
DNA (2871bp) protein (957aa)
Uncharacterized protein n=4 Tax=Escherichia coli RepID=T6XHP0_ECOLX
PstII restriction-modification enzyme Res subunit
PstII restriction-modification enzyme Res subunit {ECO:0000313|EMBL:CCQ30399.2}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
scnpilot_cont_500_p_scaffold_899_curated_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22066..22572
DNA (507bp) protein (169aa)
Uncharacterized protein n=4 Tax=Escherichia coli RepID=T6XC51_ECOLX
Putative uncharacterized protein {ECO:0000313|EMBL:EGI12953.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_899_curated_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22754..24016)
DNA (1263bp) protein (421aa)
Integrase n=1 Tax=Klebsiella oxytoca MGH 28 RepID=V3NE38_KLEOX
Integrase {ECO:0000313|EMBL:KHI98304.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
phage integrase family site-specific recombinase
scnpilot_cont_500_p_scaffold_899_curated_26
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24406..25128)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Enterobacter cloacae BWH 31 RepID=V3I313_ENTCL
Topoisomerase II {ECO:0000313|EMBL:KJX12529.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_899_curated_27
Enterobacter sp. MGH 24, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25159..25917)
DNA (759bp) protein (253aa)
UPI00039A9C1A related cluster n=1 Tax=unknown RepID=UPI00039A9C1A
tRNA-hydroxylase {ECO:0000313|EMBL:ESN15799.1}; TaxID=1329828 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter sp. MGH 24.;"
tRNA--hydroxylase
Displaying 27 items

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