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SCNpilot_cont_300_bf_scaffold_985_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_985_curated_1
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(129..2396)
DNA (2268bp) protein (756aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;"
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Polyribonucleotide nucleotidyltransferase n=1 Tax=Chryseobacterium sp. CF314 RepID=J2JJW4_9FLAO
SCNpilot_cont_300_bf_scaffold_985_curated_2
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(2522..2836)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2JHU5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC18963.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_985_curated_3
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


2983..5607
DNA (2625bp) protein (875aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3]
DNA gyrase subunit A n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X523_FLAB3
SCNpilot_cont_300_bf_scaffold_985_curated_4
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5625..7001
DNA (1377bp) protein (459aa)
TPR repeat protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X524_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KFC18961.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_985_curated_5
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7103..7756
DNA (654bp) protein (218aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
translaldolase (EC:2.2.1.2); K00616 transaldolase [EC:2.2.1.2]
Probable transaldolase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X4W6_FLAB3
SCNpilot_cont_300_bf_scaffold_985_curated_6
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7920..9248)
DNA (1329bp) protein (443aa)
Divalent metal cation transporter MntH n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0W6_FLAB3
Divalent metal cation transporter MntH {ECO:0000256|HAMAP-Rule:MF_00221}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
manganese transport protein MntH; K03322 manganese transport protein
SCNpilot_cont_300_bf_scaffold_985_curated_7
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9364..10641)
DNA (1278bp) protein (426aa)
OmpA/MotB n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0W7_FLAB3
Flagellar motor protein MotB {ECO:0000313|EMBL:KFC19180.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
OmpA/MotB
SCNpilot_cont_300_bf_scaffold_985_curated_8
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(10806..12281)
DNA (1476bp) protein (492aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15]
Proline--tRNA ligase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W7B9_9FLAO
SCNpilot_cont_300_bf_scaffold_985_curated_9
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12381..13475
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2T4K9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC20521.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_985_curated_10
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13513..14937
DNA (1425bp) protein (475aa)
Putative hemin receptor n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0X0_FLAB3
Hemin receptor {ECO:0000313|EMBL:KFC18955.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
hemin receptor
SCNpilot_cont_300_bf_scaffold_985_curated_11
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14988..15938)
DNA (951bp) protein (317aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
ribosome-associated GTPase; K06949 ribosome biogenesis GTPase [EC:3.6.1.-]
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W4F7_9FLAO
SCNpilot_cont_300_bf_scaffold_985_curated_12
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16025..17104)
DNA (1080bp) protein (360aa)
2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC:2.5.1.54 5.4.99.5); K04516 chorismate mutase [EC:5.4.99.5]
Putative 3-deoxy-7-phosphoheptulonate synthase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W4F8_9FLAO
Cytochrome C4 {ECO:0000313|EMBL:KFC20518.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
SCNpilot_cont_300_bf_scaffold_985_curated_13
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17607..18323)
DNA (717bp) protein (239aa)
Putative uncharacterized protein n=1 Tax=unidentified eubacterium SCB49 RepID=A6EME9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KFC21492.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
SCNpilot_cont_300_bf_scaffold_985_curated_14
unknown

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comp(18493..18708)
DNA (216bp) protein (72aa)

This feature has no annotations

Displaying 14 items

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