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SCNpilot_cont_300_bf_scaffold_494_curated

Search features with annotation key words

Displaying items 1-30 of 120 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_494_curated_1
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2..2437
DNA (2436bp) protein (812aa)
Uncharacterized protein n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6H1S6_FLAPJ
Uncharacterized protein {ECO:0000313|EMBL:KIA89139.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_494_curated_2
Flavobacteria bacterium BAL38, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2822..9712
DNA (6891bp) protein (2297aa)
CHU large protein uncharacterized n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J1A3_9FLAO
CHU large protein uncharacterized {ECO:0000313|EMBL:EAZ96052.1}; TaxID=391598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteria bacterium BAL38.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_494_curated_3
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9912..15422
DNA (5511bp) protein (1837aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI000375AB19
Uncharacterized protein {ECO:0000313|EMBL:KFC19994.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_494_curated_4
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15634..23286
DNA (7653bp) protein (2551aa)
Protein containing immunoglobulin-like domain n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1T0_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KFC19994.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_494_curated_5
unknown

Not on your lists

23301..23756
DNA (456bp) protein (152aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_494_curated_6
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23804..24409
DNA (606bp) protein (202aa)
undecaprenyl-phosphate galactose phosphotransferase (EC:2.7.8.6)
Bacterial sugar transferase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8T3_9FLAO
UDP-galactose phosphate transferase {ECO:0000313|EMBL:KFC19996.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
SCNpilot_cont_300_bf_scaffold_494_curated_7
Bergeyella zoohelcum, Bergeyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24413..25381
DNA (969bp) protein (323aa)
carB; carbamoyl phosphate synthase-like protein (EC:6.3.5.5); K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] rbh
Uncharacterized protein n=1 Tax=Bergeyella zoohelcum ATCC 43767 RepID=K1LFI6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKB55415.1}; TaxID=883096 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bergeyella.;" source="Bergeyella zoohelcum ATCC 43767.;"
SCNpilot_cont_300_bf_scaffold_494_curated_8
Capnocytophaga cynodegmi, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25374..26012
DNA (639bp) protein (213aa)
HAD hydrolase, family IA n=1 Tax=Bergeyella zoohelcum ATCC 43767 RepID=K1MHD6_9FLAO
Haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:CEN33973.1}; TaxID=28189 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga cynodegmi.;"
hypothetical protein; K07025 putative hydrolase of the HAD superfamily
SCNpilot_cont_300_bf_scaffold_494_curated_9
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26117..27250
DNA (1134bp) protein (378aa)
DegT/DnrJ/EryC1/StrS aminotransferase family protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VI70_9SPHI
Pyridoxal phosphate-dependent aminotransferase {ECO:0000313|EMBL:KFC19998.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis
SCNpilot_cont_300_bf_scaffold_494_curated_10
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

27268..29199
DNA (1932bp) protein (644aa)
Capsular polysaccharide biosynthesis protein n=2 Tax=Elizabethkingia anophelis RepID=H0KRL9_9FLAO
Capsule biosynthesis protein CapD {ECO:0000313|EMBL:KFC19999.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
capsular polysaccharide biosynthesis protein
SCNpilot_cont_300_bf_scaffold_494_curated_11
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29241..30026
DNA (786bp) protein (262aa)
Periplasmic protein involved in polysaccharide export n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CMV6_9FLAO
Sugar transporter {ECO:0000313|EMBL:KFC21242.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
periplasmic protein involved in polysaccharide export; K01991 polysaccharide export outer membrane protein
SCNpilot_cont_300_bf_scaffold_494_curated_12
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

32209..32451
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Riemerella anatipestifer RA-CH-1 RepID=J9R6C0_RIEAN
Capsular biosynthesis protein {ECO:0000313|EMBL:KFC21243.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
capsular exopolysaccharide family protein
SCNpilot_cont_300_bf_scaffold_494_curated_13
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

32467..33930
DNA (1464bp) protein (488aa)
hypothetical protein n=1 Tax=Elizabethkingia meningoseptica RepID=UPI0003706238
Uncharacterized protein {ECO:0000313|EMBL:AKH95618.1}; TaxID=1352940 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica FMS-007.;"
wzx3; LPS biosynthesis flippase
SCNpilot_cont_300_bf_scaffold_494_curated_14
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

33933..35003
DNA (1071bp) protein (357aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1R8_FLAB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU08381.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_cont_300_bf_scaffold_494_curated_15
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

35013..35837
DNA (825bp) protein (275aa)
Glycosyl transferase, group 2 family protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1R7_FLAB3
glycosyl transferase, group 2 family protein
Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:ACU08380.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_cont_300_bf_scaffold_494_curated_16
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

35864..36604
DNA (741bp) protein (247aa)
alpha-L-Rha alpha-1,3-L-rhamnosyltransferase (EC:2.4.1.-)
Alpha-L-Rha alpha-1,3-L-rhamnosyltransferase {ECO:0000313|EMBL:ACU08378.1}; EC=2.4.1.- {ECO:0000313|EMBL:ACU08378.1};; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
Alpha-L-Rha alpha-1,3-L-rhamnosyltransferase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1R5_FLAB3
SCNpilot_cont_300_bf_scaffold_494_curated_17
Chryseobacterium vrystaatense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

36681..37715
DNA (1035bp) protein (345aa)
Polysaccharide biosynthesis protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W4R6_9FLAO
UDP-glucose 4-epimerase {ECO:0000313|EMBL:KFF24542.1}; TaxID=307480 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium vrystaatense.;"
fnlA; UDP-L-FucpNAc biosynthesis protein FnlA
SCNpilot_cont_300_bf_scaffold_494_curated_18
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

37724..38146
DNA (423bp) protein (141aa)
WxcM-like protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W4R7_9FLAO
Sugar epimerase {ECO:0000313|EMBL:KFF18037.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
putative dTDP-4-dehydrorhamnose 3,5-epimerase
SCNpilot_cont_300_bf_scaffold_494_curated_19
Chryseobacterium vrystaatense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

38150..39268
DNA (1119bp) protein (373aa)
NAD dependent epimerase/dehydratase family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W4R8_9FLAO
Epimerase {ECO:0000313|EMBL:KFF24540.1}; TaxID=307480 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium vrystaatense.;"
fnlB; UDP-L-FucpNAc biosynthesis protein FnlB
SCNpilot_cont_300_bf_scaffold_494_curated_20
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

39349..40482
DNA (1134bp) protein (378aa)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:EFK33075.1}; EC=5.1.3.14 {ECO:0000313|EMBL:EFK33075.1};; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W4S0_9FLAO
fnlC; UDP-L-FucpNAc biosynthesis protein FnlC
SCNpilot_cont_300_bf_scaffold_494_curated_21
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

40485..41690
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003674315
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACU62184.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_300_bf_scaffold_494_curated_22
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

41884..42840
DNA (957bp) protein (319aa)
Glycosyl transferase possibly involved in lipopolysaccharide synthesis n=1 Tax=Chryseobacterium sp. CF314 RepID=J2T9W9_9FLAO
Sugar transferase {ECO:0000313|EMBL:KFC21254.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
sugar transferase
SCNpilot_cont_300_bf_scaffold_494_curated_23
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

42858..43298
DNA (441bp) protein (147aa)
Cytidyltransferase-related domain protein n=2 Tax=Elizabethkingia anophelis RepID=H0KRN5_9FLAO
Glycerol-3-phosphate cytidylyltransferase {ECO:0000313|EMBL:KFC21255.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
cytidyltransferase
SCNpilot_cont_300_bf_scaffold_494_curated_24
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

43323..43868
DNA (546bp) protein (182aa)
Dtdp-4-dehydrorhamnose 3,5-epimerase n=2 Tax=Riemerella anatipestifer RepID=E4TA04_RIEAD
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:CEJ70990.1}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;"
dtdp-4-dehydrorhamnose 3,5-epimerase
SCNpilot_cont_300_bf_scaffold_494_curated_25
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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43915..45030
DNA (1116bp) protein (372aa)
Uncharacterized protein id=3725193 bin=GWF2_Bacteroidetes_49_14 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
hypothetical protein
Tax=GWF2_Bacteroidetes_49_14_curated
SCNpilot_cont_300_bf_scaffold_494_curated_26
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

45093..46394
DNA (1302bp) protein (434aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1233951 species="Bacteria; Ba
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W4S7_9FLAO
2-methylthioadenine synthetase
SCNpilot_cont_300_bf_scaffold_494_curated_27
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

46916..47284
DNA (369bp) protein (123aa)
Putative rare lipoprotein A double-psi beta-barrel protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W4T0_9FLAO
Lipoprotein {ECO:0000313|EMBL:KFC21258.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
Rare lipoprotein A; K03642 rare lipoprotein A
SCNpilot_cont_300_bf_scaffold_494_curated_28
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(47356..47460)
DNA (105bp) protein (35aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
Methionine aminopeptidase n=1 Tax=Flavobacterium sp. F52 RepID=J1KW31_9FLAO
SCNpilot_cont_300_bf_scaffold_494_curated_29
unknown

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comp(47457..47570)
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_494_curated_30
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(48238..49860)
DNA (1623bp) protein (541aa)
60 kDa chaperonin n=1 Tax=Chryseobacterium haifense RepID=J9ZVC0_9FLAO
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;"
Heat shock protein 60 family chaperone GroEL; K04077 chaperonin GroEL
Displaying items 1-30 of 120 in total

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