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SCNpilot_cont_300_bf_scaffold_912_curated

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_912_curated_1
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1..774)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035E702E
Uncharacterized protein {ECO:0000313|EMBL:KFE97424.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
TonB-dependent receptor plug
SCNpilot_cont_300_bf_scaffold_912_curated_2
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(844..1284)
DNA (441bp) protein (147aa)
Regulatory protein MarR n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S6N7_9FLAO
MarR family transcriptional regulator {ECO:0000313|EMBL:KFF74281.1}; TaxID=1517683 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. P1-3.;"
regulatory protein MarR
SCNpilot_cont_300_bf_scaffold_912_curated_3
unknown

Not on your lists

comp(1402..1503)
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_912_curated_4
Elizabethkingia sp. BM10, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1544..2299)
DNA (756bp) protein (252aa)
LuxR family transcriptional regulator n=1 Tax=Elizabethkingia meningoseptica 502 RepID=T0NRM0_ELIME
Response regulator protein VraR {ECO:0000313|EMBL:AJW64980.1}; TaxID=722877 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia sp. BM10.;"
response regulator ing a CheY-like receiver domain and an HTH DNA-binding domain-containing protein
SCNpilot_cont_300_bf_scaffold_912_curated_5
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2475..3191
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6E6X1_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ETZ21975.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_912_curated_6
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3268..3519
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z0S1_FLABF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB69466.1}; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium branchiophilum (strain FL-15).;"
SCNpilot_cont_300_bf_scaffold_912_curated_7
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3711..4043
DNA (333bp) protein (111aa)
HopJ type III effector protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2JYW7_9FLAO
Type III effector {ECO:0000313|EMBL:KIA82583.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
Type III effector HopPmaJ
SCNpilot_cont_300_bf_scaffold_912_curated_8
unknown

Not on your lists

4092..4214
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_912_curated_9
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4342..4506
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2T7L4_9FLAO
Phosphatidate cytidylyltransferase {ECO:0000313|EMBL:KFC19459.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_912_curated_10
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4553..4840)
DNA (288bp) protein (96aa)
Rhodanese domain protein n=3 Tax=Elizabethkingia RepID=H0KP98_9FLAO
Sulfurtransferase {ECO:0000313|EMBL:KGO08906.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
rhodanese-like protein
SCNpilot_cont_300_bf_scaffold_912_curated_11
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4971..5894
DNA (924bp) protein (308aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
Epoxyqueuosine reductase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8A1_9FLAO
putative Fe-S protein
SCNpilot_cont_300_bf_scaffold_912_curated_12
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6129..6812
DNA (684bp) protein (228aa)
Uncharacterized protein n=2 Tax=Elizabethkingia anophelis RepID=L8K043_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC19462.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_912_curated_13
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6873..8465
DNA (1593bp) protein (531aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00037B983E
Uncharacterized protein {ECO:0000313|EMBL:KGO79505.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
secreted trypsin-like lysyl endopeptidase, Por secretion system C-terminal sorting domain protein
SCNpilot_cont_300_bf_scaffold_912_curated_14
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


8561..10858
DNA (2298bp) protein (766aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
Alanine--tRNA ligase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W7E2_9FLAO
alanyl-tRNA synthetase
SCNpilot_cont_300_bf_scaffold_912_curated_15
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10900..11145
DNA (246bp) protein (82aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7]
Alanine--tRNA ligase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W7E2_9FLAO
Suspect SCG annotation. See neighboring gene [SCNpilot_cont_300_bf_scaffold_912_curated_14].
SCNpilot_cont_300_bf_scaffold_912_curated_16
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11201..11683)
DNA (483bp) protein (161aa)
phosphohistidine phosphatase SixA; K08296 phosphohistidine phosphatase [EC:3.1.3.-]
Phosphoglycerate mutase family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VWM0_9FLAO
Phosphohistidine phosphatase {ECO:0000313|EMBL:KFC18371.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
SCNpilot_cont_300_bf_scaffold_912_curated_17
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11770..12711)
DNA (942bp) protein (314aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
2-dehydropantoate 2-reductase n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CIL8_ELIME
2-dehydropantoate 2-reductase
SCNpilot_cont_300_bf_scaffold_912_curated_18
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13017..13649
DNA (633bp) protein (211aa)
Uncharacterized protein n=4 Tax=Myroides odoratimimus RepID=H1GK76_9FLAO
TetR family transcriptional regulator {ECO:0000313|EMBL:KFF21658.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
TetR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_912_curated_19
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13650..14153)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2JX65_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC22208.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_912_curated_20
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14215..14793
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VZ74_9FLAO
HupE / UreJ protein {ECO:0000313|EMBL:KFF10309.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_912_curated_21
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15037..17409
DNA (2373bp) protein (791aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2T362_9FLAO
Aminopeptidase {ECO:0000313|EMBL:KFC21265.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
Zn-dependent aminopeptidase
SCNpilot_cont_300_bf_scaffold_912_curated_22
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17567..17743
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W929_9FLAO
Histone H1 {ECO:0000313|EMBL:KFC20342.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
Histone H1-like protein Hc1.
SCNpilot_cont_300_bf_scaffold_912_curated_23
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17937..19355
DNA (1419bp) protein (473aa)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109};; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
6-phosphogluconate dehydrogenase; K00033 6-phosphogluconate dehydrogenase [EC:1.1.1.44]
6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W1S8_9FLAO
SCNpilot_cont_300_bf_scaffold_912_curated_24
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19365..20840
DNA (1476bp) protein (492aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49); K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49]
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W1S9_9FLAO
SCNpilot_cont_300_bf_scaffold_912_curated_25
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20861..21574
DNA (714bp) protein (238aa)
6-phosphogluconolactonase; K01057 6-phosphogluconolactonase [EC:3.1.1.31]
6-phosphogluconolactonase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W1T0_9FLAO
6-phosphogluconolactonase {ECO:0000313|EMBL:KFC20613.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
SCNpilot_cont_300_bf_scaffold_912_curated_26
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21658..22479)
DNA (822bp) protein (274aa)
chloride peroxidase; K00433 chloride peroxidase [EC:1.11.1.10]
Hydrolase, alpha/beta domain protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W3F7_9FLAO
Putative hydrolase {ECO:0000313|EMBL:GAE66781.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
SCNpilot_cont_300_bf_scaffold_912_curated_27
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22616..23572)
DNA (957bp) protein (319aa)
Dyp-type peroxidase family n=1 Tax=Chryseobacterium sp. CF314 RepID=J2KKS6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:GAE65799.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
Dyp-type peroxidase; K07223 putative iron-dependent peroxidase
SCNpilot_cont_300_bf_scaffold_912_curated_28
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23754..24503
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W108_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EFK36184.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
protein of unknown function DUF81
SCNpilot_cont_300_bf_scaffold_912_curated_29
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24519..24761
DNA (243bp) protein (81aa)
Putative molybdopterin converting factor, subunit 1 n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W107_9FLAO
Putative molybdopterin converting factor, subunit 1 {ECO:0000313|EMBL:EFK36183.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
molybdopterin converting factor, subunit 1
SCNpilot_cont_300_bf_scaffold_912_curated_30
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24767..25183
DNA (417bp) protein (139aa)
Molybdopterin converting factor, subunit 2 n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W106_9FLAO
Molybdopterin converting factor, subunit 2 {ECO:0000313|EMBL:EFK36182.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
moaE; MoaE protein
Displaying items 1-30 of 36 in total

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