ggKbase home page

SCNpilot_cont_300_bf_scaffold_386_curated_2

Organism: scnpilot_dereplicated_Epilithonimonas_1

near complete RP 53 / 55 MC: 10 BSCG 51 / 51 MC: 6 ASCG 13 / 38 MC: 2
Location: comp(238..1005)

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TraA n=1 Tax=Empedobacter brevis RepID=UPI000368C72F similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 255.0
  • Bit_score: 445
  • Evalue 3.80e-122
Conjugal transfer protein TraA {ECO:0000313|EMBL:KEQ31107.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 255.0
  • Bit_score: 442
  • Evalue 4.50e-121
chromosome partitioning ATPase similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 255.0
  • Bit_score: 299
  • Evalue 1.40e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter antarcticus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 768
ATGGAAACAACAAAGAAAACTTTAAAAATCAGTTTCTCCACCCAAAAAGGCGGGGTGGGAAAATCAACGATGACAACCCTTGTGGCAAGTGTGCTTCACTACCGCTTGGGCTATAATGTACTTGTAATGGACTGTGACTTTCCACAACACAGCCTTACCCATTTGCGTGAAAGGGATATGAAAACCATTATGCAGAACGAATACCACAAGAAAATGGCAATGAAACAGTTTCAAGCCATTAACAAAAAGGCATACCCGATTATCAGGTGCAAAGCTGATACCGCCTTGCAGACCGCTTCGGAACACGTAAGCCAATCGGCAGTTAAGCCTGATGTGATTTTCTTTGATTTGCCGGGAACGGCAAATACCAAAGGTGTCCTGACCACCTTAAAAAAAATGGACTTTATCTTTTCCCCGATTACCGCAGACCGTTTGGTCGTGGAAAGTACATTGGGCTTTACAAAAGCATTTATCGGGCTTCCGCAGATTGAGGGCGAAAACAAAGCACAGGTAATGTGGCTGTTTTGGAACCAAGTGGACGGCAGGGAAAAAACGGGCGTGTACGAAGCGTACCAAAGCGTAATCAAACAGCTCAACCTGCGTATAATGCAGACAAGGATAATGGACAGCAAGCGTTTTCGAAAGGAAACGGACGACACAGGCACTTATGTATTCAGGTCGAGCCTGCTACCTGCGGAAGTGCAGTTGATGAAAGCGACCAAATTGGATTTGTTTGTAGATGAGTTTTTAAAAATCGTTCAACTGTAA
PROTEIN sequence
Length: 256
METTKKTLKISFSTQKGGVGKSTMTTLVASVLHYRLGYNVLVMDCDFPQHSLTHLRERDMKTIMQNEYHKKMAMKQFQAINKKAYPIIRCKADTALQTASEHVSQSAVKPDVIFFDLPGTANTKGVLTTLKKMDFIFSPITADRLVVESTLGFTKAFIGLPQIEGENKAQVMWLFWNQVDGREKTGVYEAYQSVIKQLNLRIMQTRIMDSKRFRKETDDTGTYVFRSSLLPAEVQLMKATKLDLFVDEFLKIVQL*