ggKbase home page

SCNpilot_cont_300_bf_scaffold_1105_curated_8

Organism: scnpilot_dereplicated_Epilithonimonas_1

near complete RP 53 / 55 MC: 10 BSCG 51 / 51 MC: 6 ASCG 13 / 38 MC: 2
Location: 6436..7455

Top 3 Functional Annotations

Value Algorithm Source
Putative exonuclease, DNA ligase-associated n=1 Tax=Chryseobacterium sp. CF314 RepID=J2TCG9_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 337.0
  • Bit_score: 610
  • Evalue 1.20e-171
mRNA 3'-end processing factor {ECO:0000313|EMBL:KFF01120.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 337.0
  • Bit_score: 662
  • Evalue 2.80e-187
mRNA 3'-end processing factor; K07577 putative mRNA 3-end processing factor similarity KEGG
DB: KEGG
  • Identity: 72.6
  • Coverage: 332.0
  • Bit_score: 497
  • Evalue 3.50e-138

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chryseobacterium formosense → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1020
ATGGCGAAACTAATCACATTCACAAACAAAGGAATTTATTGTCCTCAAGGAAAATTCTATATCGATCCGTGGCGGCCTGTCGATTTGGCGGTCATTACGCACGGTCATGCCGATCACGCACGCTGGGGAATGAAAAAATACCTTTGTCATCATTTTACCAAACCGATTTTACATAAAAGAATCAGTGAAGATATCGAATGTCAAAGTGTGGAATATGGTGAAATCATTAATATCAATGGCGTAAAAGTCTCGCTTCATCCTGCTGGTCATATTATCGGCTCTGCACAGATCAGGTTAGAATATAAAGGTTATGTGAGTGTTGTTTCGGGAGACTATAAGGTTCAGGACGACGGTTTAAGTACGCCTTTTGAACTTGTAAAATGCAATGAATTTGTCACGGAGAGCACTTTCGGACTTCCTATCTACAACTGGCTGGAAGTTAATGATCTAAATAAAAAACTGCAAAGCTGGGTTCTCAGAAATCAGGAAAATCAGAAAACATCGGTTTTTATCGGTTATTCTTTGGGTAAGGCACAACGCATCATGAAAGCTGTTGAAGGCTTGGGAAAGATTCACGTTCATTACTCCATCGGCAAGCTTAATCAGGCTTTTGAAGAAGTTGGAATTGTTCTTCCTGAATATGAAATTCCTGATTTTCGGGAAAGTATAAAACACATTGTGGGAGACATTGTCATCGTTCCACCCGCTTTATTGGATTCAAATGTTATTAAAAAAATTCCTGACGCTGCGACAGCGATTTGTTCAGGCTGGATGCAGGTTCGCGGTGCCAGAAGATGGCGAAGTGCGGATGCAGGTTTTGCATTGAGCGATCACGCCGATTGGAAAGGTCTGTTACAAGCCATAAAAGCGACCGAAGCCGAAATTGTTCACGTCACACACGGACAAACCGAAGTTTTTTCTAAATATTTAAATGAAATCGGAATTAAATCTGATGTCGTTGAAACCCTATATGGTGACGATGACGAAGAAGAGAAAGAAAAAGATATTATCAAAGATTAA
PROTEIN sequence
Length: 340
MAKLITFTNKGIYCPQGKFYIDPWRPVDLAVITHGHADHARWGMKKYLCHHFTKPILHKRISEDIECQSVEYGEIININGVKVSLHPAGHIIGSAQIRLEYKGYVSVVSGDYKVQDDGLSTPFELVKCNEFVTESTFGLPIYNWLEVNDLNKKLQSWVLRNQENQKTSVFIGYSLGKAQRIMKAVEGLGKIHVHYSIGKLNQAFEEVGIVLPEYEIPDFRESIKHIVGDIVIVPPALLDSNVIKKIPDAATAICSGWMQVRGARRWRSADAGFALSDHADWKGLLQAIKATEAEIVHVTHGQTEVFSKYLNEIGIKSDVVETLYGDDDEEEKEKDIIKD*