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SCNpilot_cont_300_bf_scaffold_1105_curated

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1105_curated_1
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1..372
-----------------
DNA (372bp)
protein (124aa)
altronate hydrolase (EC:4.2.1.7); K01685 altronate hydrolase [EC:4.2.1.7]
Altronate hydrolase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1L3_FLAB3
Altronate hydrolase {ECO:0000313|EMBL:KFC21611.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
SCNpilot_cont_300_bf_scaffold_1105_curated_2
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(649..954)
-----------------
DNA (306bp)
protein (102aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SCQ0_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY53894.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCNpilot_cont_300_bf_scaffold_1105_curated_3
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1381..3240)
-----------------
DNA (1860bp)
protein (620aa)
ATP-dependent DNA ligase family protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X5D0_FLAB3
ATP-dependent DNA ligase {ECO:0000313|EMBL:KFC20356.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
ATP-dependent DNA ligase family protein
SCNpilot_cont_300_bf_scaffold_1105_curated_4
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3306..3917)
-----------------
DNA (612bp)
protein (204aa)
ATP-dependent DNA ligase (EC:6.5.1.1)
ATP-dependent DNA ligase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X5D1_FLAB3
3'-phosphoesterase {ECO:0000313|EMBL:KFC20355.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
SCNpilot_cont_300_bf_scaffold_1105_curated_5
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4005..4784)
-----------------
DNA (780bp)
protein (260aa)
Probable DNA repair protein HMPREF0204_11662 n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VYR4_9FLAO
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
Ku domain protein; K10979 DNA end-binding protein Ku
SCNpilot_cont_300_bf_scaffold_1105_curated_6
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4947..5807
-----------------
DNA (861bp)
protein (287aa)
Short-chain dehydrogenase/reductase, probable oxidoreductase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X5C6_FLAB3
Short-chain dehydrogenase {ECO:0000313|EMBL:KFC21600.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
short-chain dehydrogenase/reductase, oxidoreductase
SCNpilot_cont_300_bf_scaffold_1105_curated_7
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5841..6347
-----------------
DNA (507bp)
protein (169aa)
Pyridoxamine 5'-phosphate oxidase family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W358_9FLAO
General stress protein {ECO:0000313|EMBL:KFC18018.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
General stress protein
SCNpilot_cont_300_bf_scaffold_1105_curated_8
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6436..7455
-----------------
DNA (1020bp)
protein (340aa)
Putative exonuclease, DNA ligase-associated n=1 Tax=Chryseobacterium sp. CF314 RepID=J2TCG9_9FLAO
mRNA 3'-end processing factor {ECO:0000313|EMBL:KFF01120.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
mRNA 3'-end processing factor; K07577 putative mRNA 3-end processing factor
SCNpilot_cont_300_bf_scaffold_1105_curated_9
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7683..9263
-----------------
DNA (1581bp)
protein (527aa)
ATP-dependent DNA ligase {ECO:0000313|EMBL:KFF01121.1}; EC=6.5.1.1 {ECO:0000313|EMBL:KFF01121.1};; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
ATP-dependent DNA ligase domain protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W347_9FLAO
SCNpilot_cont_300_bf_scaffold_1105_curated_10
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9421..11868
-----------------
DNA (2448bp)
protein (816aa)
Helicase domain protein; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-]
DEAD/DEAH box helicase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W348_9FLAO
ATP-dependent RNA helicase SrmB {ECO:0000313|EMBL:CEJ69379.1}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;"
SCNpilot_cont_300_bf_scaffold_1105_curated_11
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11971..12615
-----------------
DNA (645bp)
protein (215aa)
Ser/Thr phosphatase family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W350_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF01123.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
metallophosphoesterase
SCNpilot_cont_300_bf_scaffold_1105_curated_12
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12612..12872)
-----------------
DNA (261bp)
protein (87aa)
MtN3/saliva family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VY59_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC18027.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
hypothetical protein; K15383 MtN3 and saliva related transmembrane protein
SCNpilot_cont_300_bf_scaffold_1105_curated_13
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12869..13849)
-----------------
DNA (981bp)
protein (327aa)
Catalase (EC:1.11.1.6)
Catalase n=1 Tax=Chryseobacterium sp. CF314 RepID=J2JQS9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC20381.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
SCNpilot_cont_300_bf_scaffold_1105_curated_14
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13927..14349)
-----------------
DNA (423bp)
protein (141aa)
Cold-shock DNA-binding domain protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W893_9FLAO
Cold-shock protein {ECO:0000313|EMBL:KFC20379.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
Cold shock protein
SCNpilot_cont_300_bf_scaffold_1105_curated_15
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14694..15638
-----------------
DNA (945bp)
protein (315aa)
Core-2/I-Branching enzyme n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W879_9FLAO
Glycosyl transferase {ECO:0000313|EMBL:KFF29026.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
glycosyl transferase family protein
SCNpilot_cont_300_bf_scaffold_1105_curated_16
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15680..17194)
-----------------
DNA (1515bp)
protein (505aa)
Acyl-CoA dehydrogenase domain-containing protein n=2 Tax=Elizabethkingia meningoseptica RepID=R9CRX7_ELIME
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KFC20378.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
acyl-CoA dehydrogenase domaiN-containing protein
SCNpilot_cont_300_bf_scaffold_1105_curated_17
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17379..17744
-----------------
DNA (366bp)
protein (122aa)
Putative fluoride ion transporter CrcB n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X4K7_FLAB3
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
CrcB-like protein; K06199 CrcB protein
SCNpilot_cont_300_bf_scaffold_1105_curated_18
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18195..18518
-----------------
DNA (324bp)
protein (108aa)
Integrase family protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YCV7_9SPHI
Transposase {ECO:0000313|EMBL:CDN72844.1}; TaxID=1117645 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis.;"
transposase
SCNpilot_cont_300_bf_scaffold_1105_curated_19
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18526..19392
-----------------
DNA (867bp)
protein (289aa)
Probable transposase n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=R7RU48_FLAPJ
Transposase {ECO:0000313|EMBL:CDN72844.1}; TaxID=1117645 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1105_curated_20
unknown

Not on your lists

comp(19576..21510)
-----------------
DNA (1935bp)
protein (645aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1105_curated_21
Myroides odoratimimus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21507..22661)
-----------------
DNA (1155bp)
protein (385aa)
Putative uncharacterized protein n=1 Tax=Myroides odoratimimus CIP 101113 RepID=H1H5J2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHO13225.1}; TaxID=883154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratimimus CIP 101113.;"
SCNpilot_cont_300_bf_scaffold_1105_curated_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22815..24425)
-----------------
DNA (1611bp)
protein (537aa)
ATP-dependent DNA helicase, RecQ family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG61_NIAKG
RecQ familyATP-dependent DNA helicase
ATP-dependent DNA helicase, RecQ family {ECO:0000313|EMBL:AEW01664.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_300_bf_scaffold_1105_curated_23
Lactobacillus ruminis, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24425..25795)
-----------------
DNA (1371bp)
protein (457aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI000373918A
SEFIR domain containing protein
Uncharacterized protein {ECO:0000313|EMBL:EGM49817.1}; TaxID=1040964 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus ruminis SPM0211.;"
SCNpilot_cont_300_bf_scaffold_1105_curated_24
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26121..28895)
-----------------
DNA (2775bp)
protein (925aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 3_2_5 RepID=C6ICF8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:ETD70930.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
SCNpilot_cont_300_bf_scaffold_1105_curated_25
unknown

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comp(28935..29594)
-----------------
DNA (660bp)
protein (220aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1105_curated_26
Psychroflexus torquis, Psychroflexus, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29732..30571)
-----------------
DNA (840bp)
protein (280aa)
Uncharacterized protein n=1 Tax=Psychroflexus torquis (strain ATCC 700755 / ACAM 623) RepID=K4IBE9_PSYTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU67927.1}; TaxID=313595 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Psychroflexus.;" source="Psychroflexus torquis (strain ATCC 700755 / ACAM 623).;"
SCNpilot_cont_300_bf_scaffold_1105_curated_27
unknown

Not on your lists

comp(30664..31029)
-----------------
DNA (366bp)
protein (122aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1105_curated_28
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31244..31417)
-----------------
DNA (174bp)
protein (58aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida CSV86 RepID=L1LTC6_PSEPU
Uncharacterized protein {ECO:0000313|EMBL:BAP32381.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1105_curated_29
Chryseobacterium luteum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31536..31757)
-----------------
DNA (222bp)
protein (74aa)
Uncharacterized protein n=2 Tax=Myroides RepID=K1HNX1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF02050.1}; TaxID=421531 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium luteum.;"
SCNpilot_cont_300_bf_scaffold_1105_curated_30
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

32264..32794
-----------------
DNA (531bp)
protein (177aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0H1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:CDN76587.1}; TaxID=1117645 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis.;"
hypothetical protein
Displaying items 1-30 of 32 in total

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