ggKbase home page

scnpilot_p_inoc_scaffold_167_curated

Search features with annotation key words

Displaying items 31-60 of 132 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_167_curated_31
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

35875..37431
DNA (1557bp) protein (519aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003640A96
Uncharacterized protein {ECO:0000313|EMBL:ETZ22431.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
scnpilot_p_inoc_scaffold_167_curated_32
Myroides profundi, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

38164..38940
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037820D2
Uncharacterized protein {ECO:0000313|EMBL:AJH15725.1}; TaxID=480520 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides profundi.;"
scnpilot_p_inoc_scaffold_167_curated_33
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

38970..40535
DNA (1566bp) protein (522aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003640A96
Uncharacterized protein {ECO:0000313|EMBL:ETZ22431.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
scnpilot_p_inoc_scaffold_167_curated_34
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

40814..41710
DNA (897bp) protein (299aa)
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:KGO11030.1}; EC=1.1.1.157 {ECO:0000313|EMBL:KGO11030.1};; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CJI2_ELIME
3-hydroxybutyryl-CoA dehydrogenase FadB
scnpilot_p_inoc_scaffold_167_curated_35
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

41745..42377
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VZA0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:GAE65368.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
hypothetical protein
scnpilot_p_inoc_scaffold_167_curated_36
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

42501..42977
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S699_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU19925.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
hypothetical protein
scnpilot_p_inoc_scaffold_167_curated_37
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

42981..44153
DNA (1173bp) protein (391aa)
Family 2 glycosyl transferase n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SPG6_9FLAO
Family 2 glycosyl transferase {ECO:0000313|EMBL:ESU28112.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
family 2 glycosyl transferase
scnpilot_p_inoc_scaffold_167_curated_38
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

44154..47762
DNA (3609bp) protein (1203aa)
Acyltransferase MMPL family {ECO:0000313|EMBL:ESU28111.1}; EC=2.7.7.6 {ECO:0000313|EMBL:ESU28111.1};; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
Acyltransferase MMPL family n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SNB4_9FLAO
phospholipid/glycerol acyltransferase; K07003
scnpilot_p_inoc_scaffold_167_curated_39
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

47759..49279
DNA (1521bp) protein (507aa)
All-trans-retinol 13,14-reductase n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SBF8_9FLAO
All-trans-retinol 13,14-reductase {ECO:0000313|EMBL:KGO96088.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
all-trans-retinol 13,14-reductase
scnpilot_p_inoc_scaffold_167_curated_40
Chryseobacterium vrystaatense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

49276..50925
DNA (1650bp) protein (550aa)
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VWV9_9FLAO
Acyl-CoA:6-aminopenicillanic acid acyl-transferase {ECO:0000313|EMBL:KFF28601.1}; TaxID=307480 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium vrystaatense.;"
cysteine endopeptidase, family c45
scnpilot_p_inoc_scaffold_167_curated_41
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


51063..54557
DNA (3495bp) protein (1165aa)
isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5]
Isoleucine--tRNA ligase n=1 Tax=Imtechella halotolerans K1 RepID=I0WJU7_9FLAO
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_167_curated_42
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(54612..55124)
DNA (513bp) protein (171aa)
hypothetical protein MzeaS_13410 id=4343982 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
kila-n, DNA-binding domain
Tax=GWA2_Bacteroidetes_32_17_curated
scnpilot_p_inoc_scaffold_167_curated_43

Not on your lists

55273..56994
DNA (1722bp) protein (574aa)
Uncharacterized protein n=1 Tax=Glaciecola arctica BSs20135 RepID=K6XIJ5_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:KKO00291.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
surface protein 26-residue repeat-containing protein
scnpilot_p_inoc_scaffold_167_curated_44
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(57030..59444)
DNA (2415bp) protein (805aa)
Prolyl oligopeptidase n=1 Tax=Imtechella halotolerans K1 RepID=I0WE86_9FLAO
prolyl oligopeptidase
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_167_curated_45
Clostridium autoethanogenum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(59526..60536)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=U5RQN9_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGY75091.1}; TaxID=1341692 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium autoethanogenum DSM 10061.;"
scnpilot_p_inoc_scaffold_167_curated_46
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(60541..61128)
DNA (588bp) protein (196aa)
Sugar transferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IA22_FLUTR
sugar transferase
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_167_curated_47
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(61237..61683)
DNA (447bp) protein (149aa)
GatB/YqeY domain-containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAQ4_FLUTR
GatB/YqeY domain-containing protein; K09117 hypothetical protein
GatB/YqeY domain-containing protein {ECO:0000313|EMBL:AEA44209.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_167_curated_48
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(61781..63364)
DNA (1584bp) protein (528aa)
Cell division protein FtsZ n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAQ3_FLUTR
cell division protein FtsZ; K03531 cell division protein FtsZ
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_167_curated_49
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(63406..64725)
DNA (1320bp) protein (440aa)
Cell division protein ftsA n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAQ2_FLUTR
cell division protein FtsA; K03590 cell division protein FtsA
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_167_curated_50
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(64738..65529)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAP8_FLUTR
hypothetical protein; K03589 cell division protein FtsQ
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_167_curated_51
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(65532..66890)
DNA (1359bp) protein (453aa)
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8); K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAP7_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_167_curated_52
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(66896..67996)
DNA (1101bp) protein (367aa)
N-acetylglucosaminyl transferase; K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda (str
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BLI8_ZUNPS
scnpilot_p_inoc_scaffold_167_curated_53
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(67993..69195)
DNA (1203bp) protein (401aa)
Cell cycle protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAP5_FLUTR
cell cycle protein; K03588 cell division protein FtsW
Cell cycle protein {ECO:0000313|EMBL:AEA44200.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_167_curated_54
unknown

Not on your lists

comp(69192..69638)
DNA (447bp) protein (149aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_167_curated_55
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(69657..71000)
DNA (1344bp) protein (448aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9); K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAP3_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_167_curated_56
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(71002..72249)
DNA (1248bp) protein (416aa)
phospho-N-acetylmuramoyl-pentapeptide-transferase; K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAP2_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_167_curated_57
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(72251..73711)
DNA (1461bp) protein (487aa)
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase; K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Pedobacter arcticus RepID=UPI0003715922
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_167_curated_58
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(73713..75824)
DNA (2112bp) protein (704aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129); K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129]
Peptidoglycan glycosyltransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAN9_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_167_curated_59
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(75821..76204)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAN8_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_167_curated_60
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(76201..77121)
DNA (921bp) protein (307aa)
Ribosomal RNA small subunit methyltransferase H; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAN7_FLUTR
Displaying items 31-60 of 132 in total

View Taxonomy