ggKbase home page

scnpilot_p_inoc_scaffold_167_curated_60

Organism: scnpilot_dereplicated_Flavobacteriia_1

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(76201..77121)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] similarity KEGG
DB: KEGG
  • Identity: 69.2
  • Coverage: 302.0
  • Bit_score: 424
  • Evalue 3.40e-116
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.2
  • Coverage: 302.0
  • Bit_score: 424
  • Evalue 1.50e-115
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAN7_FLUTR similarity UNIREF
DB: UNIREF100
  • Identity: 69.2
  • Coverage: 302.0
  • Bit_score: 424
  • Evalue 1.10e-115

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Fluviicola taffensis → Fluviicola → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 921
ATGACAGCGAAGAATAACGAAGCTTACCACATACCGGTGATGTTGCAGCCTTGTATTGACGGGCTGAATATTCGTCCTGACGGGGCGTATGTTGACGTGACCTTTGGAGGTGGCGGACATTCAAGAGCAATTTTCGGAAAGTTATCAGAAGAAGGGAAATTAGTGGTATTTGATCAGGATGCTGATGCAAAGCGAAATGCCTGGGAAGCACCTAATTTTTTCTTTGTTCCGTCCAATTTCTCATTTCTTAAAAATCACCTGAGAGCTCTGGGGATTACGCAGGTCGATGGAATACTTGCGGATCTCGGAGTTTCCTCTTTTCAGTTTGATGAAGAAGGAAAACGGGGTTTCTCCATTCGTTTTGATGATCCGCTGGATATGCGGATGAATCAGTCGCAGGGACTTTCTGCAAAGGAAGTGCTGAATACGTATTCGGAAGAAGAGCTGGCAAGGGTTTTCGGAAAGTATGGTGAAGTGGACAGACCGATGAAAACGGCTTTGGAGATTTGCAAGTTCCGTTCAAAACAACCGTTGGAAACGACATTTGATCTGATCGAAGCGATTAAGCGCTTTGCTCCTAAAAATAAAGAACAGAAATTTTACGCGCAGGTTTTTCAGGCGATCCGTATTGAGGTGAACAACGAAATGGACGTATTGGAAAAATTCCTGACGCAAGCTGCTGAAGTATTGAAGCCCGGCGGAAGACTGGTGGTAATGTCTTACCATTCACTGGAAGACCGTCTGGTGAAAAACTTCATGAAACGTGGTCATCTTGACGGAACAATTGAGAAGGATTTCTTCGGAAATGTGTTGAAGCCTCTGGATGAGGTTACCAGAAAACCAATTGTTGCAGATGAAGAAGAGCTGGAAAGAAACTCCAGGGCAAGAAGTGCAAAATTGCGGATTGCAGAGAAAAGATGA
PROTEIN sequence
Length: 307
MTAKNNEAYHIPVMLQPCIDGLNIRPDGAYVDVTFGGGGHSRAIFGKLSEEGKLVVFDQDADAKRNAWEAPNFFFVPSNFSFLKNHLRALGITQVDGILADLGVSSFQFDEEGKRGFSIRFDDPLDMRMNQSQGLSAKEVLNTYSEEELARVFGKYGEVDRPMKTALEICKFRSKQPLETTFDLIEAIKRFAPKNKEQKFYAQVFQAIRIEVNNEMDVLEKFLTQAAEVLKPGGRLVVMSYHSLEDRLVKNFMKRGHLDGTIEKDFFGNVLKPLDEVTRKPIVADEEELERNSRARSAKLRIAEKR*