ggKbase home page

scnpilot_p_inoc_scaffold_950_curated_6

Organism: scnpilot_dereplicated_Flavobacteriia_1

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(6744..7775)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 63.5
  • Coverage: 340.0
  • Bit_score: 467
  • Evalue 3.00e-129
Pseudouridine synthase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9C7_FLUTR similarity UNIREF
DB: UNIREF100
  • Identity: 63.5
  • Coverage: 340.0
  • Bit_score: 467
  • Evalue 9.70e-129
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.6
  • Coverage: 345.0
  • Bit_score: 485
  • Evalue 8.20e-134

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Bacteroidetes_44_7 → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1032
GTGATCAACGACGAGCAGGAACAGATAGAAGAACAATCCGAGGAATTATACGAGCATTATTCCTTTAAGGCCGATAAAGGACAGATAATGGTCCGCATCGACAAGTTCCTGATGGACCGTATGCCGAATACTTCCAGAAACAGAATTCAGAATTCCTGCAAATCCGGAAATGTTCTGGTAAATAAGATTGCTGTAAAACAGAACTATAAAGTAAAGCCCGGAGATGAGATATCTGTGGTAATGCCCTATCCTATCCGGGAGATTGAACTGATTCCGCAGAATATCCCGATTGATATTGTATATGAAGATGATGATGTTGCGGTAGTAAATAAGCCTGCAAATATGGTTGTTCATCCGGCGTACGGAAATTATACGGGAACACTGGTAAATGCGATGATGTACCATTTTCAGAATTTACCGGAAAAAAAACAGGATTTTTACGGACGTCCCGGGCTGGTACACCGTATTGATAAGCATACGACAGGCTTATTAGTTATTGCGAAGACGGAATTCGCGCTGACACATCTTGCCAATCAGTTTTTTGAGAAAACGACGAAAAGAAGATACCAGGCATTGGTTTGGGGAAATATAAAGCAAGATGAAGGAACCATTACGAATTACCTGGGAAGATCACCCAAAAACAGGAAGATAATTACCGTTTTCGACAATGAAAATGACGGAAAGATTGCAATAACACATTATAAGGTATTAGAACGGTTCTCCTGCTTTACGCTGGTGGAGTGCATATTAGAAACCGGCCGAACGCATCAGATCCGCGTCCACATGAAACACATGGGACATCCCCTATTCAACGACCTCGAATATGGAGGTGATAGTATTTTAGCGGGACCAAACACGGCAAATTATAAAAAATTCATCCAGAATTGTTTTGATCTGATTCCCGGCCAGGCACTTCATGCAAAATTATTGGGGTTTAAACATCCGGTGACGGGAAAAGAGCTTGTATTCGATTCAGAGCTGCCGGAAGGGTTCCAAAATCTGATTGATAAAATCAAAAAATTCGACGGATAG
PROTEIN sequence
Length: 344
VINDEQEQIEEQSEELYEHYSFKADKGQIMVRIDKFLMDRMPNTSRNRIQNSCKSGNVLVNKIAVKQNYKVKPGDEISVVMPYPIREIELIPQNIPIDIVYEDDDVAVVNKPANMVVHPAYGNYTGTLVNAMMYHFQNLPEKKQDFYGRPGLVHRIDKHTTGLLVIAKTEFALTHLANQFFEKTTKRRYQALVWGNIKQDEGTITNYLGRSPKNRKIITVFDNENDGKIAITHYKVLERFSCFTLVECILETGRTHQIRVHMKHMGHPLFNDLEYGGDSILAGPNTANYKKFIQNCFDLIPGQALHAKLLGFKHPVTGKELVFDSELPEGFQNLIDKIKKFDG*