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scnpilot_p_inoc_scaffold_950_curated

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_950_curated_1
unknown

Not on your lists

comp(473..1906)
DNA (1434bp) protein (478aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_950_curated_2
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1972..2538
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IGL3_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA42619.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_950_curated_3
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(2641..3675)
DNA (1035bp) protein (345aa)
Protein RecA n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IGN3_FLUTR
Protein recA; K03553 recombination protein RecA
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_950_curated_4
Schleiferia thermophila, Schleiferia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3737..4207)
DNA (471bp) protein (157aa)
peroxiredoxin; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15]
Peroxiredoxin n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PNY1_CHIPD
Thiol peroxidase {ECO:0000313|EMBL:KFD39535.1}; TaxID=1453500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Schleiferiaceae; Schleiferia.;" source="Schleiferia thermophila str. Yellowstone.;"
scnpilot_p_inoc_scaffold_950_curated_5
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4524..6605)
DNA (2082bp) protein (694aa)
OmpA/MotB domain protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9C8_FLUTR
OmpA/MotB domain-containing protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_950_curated_6
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(6744..7775)
DNA (1032bp) protein (344aa)
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Pseudouridine synthase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9C7_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_950_curated_7
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(7828..8133)
DNA (306bp) protein (102aa)
FeS assembly SUF system protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9A5_FLUTR
FeS assembly SUF system protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_950_curated_8
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8130..8555)
DNA (426bp) protein (142aa)
Cysteine desulfuration protein SufE n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9A6_FLUTR
Cysteine desulfuration protein SufE; K02426 cysteine desulfuration protein SufE
Cysteine desulfuration protein SufE {ECO:0000313|EMBL:AEA44063.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_950_curated_9
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8555..9790)
DNA (1236bp) protein (412aa)
cysteine desulfurase (EC:2.8.1.7 4.4.1.16); K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
Cysteine desulfurase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9A7_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_950_curated_10
unknown

Not on your lists

comp(9982..10698)
DNA (717bp) protein (239aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_950_curated_11
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10928..11686
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKC4_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA44027.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_950_curated_12
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11689..12894
DNA (1206bp) protein (402aa)
Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; K02527 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKC5_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_950_curated_13
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12986..16282)
DNA (3297bp) protein (1099aa)
PKD domain containing protein id=4534882 bin=GWF2_Bacteroidetes_35_48 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
PKD domain-containing protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_950_curated_14
Fervidobacterium pennivorans, Fervidobacterium, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

16428..16658
DNA (231bp) protein (77aa)
Fe2+ transport system protein A n=1 Tax=Fervidobacterium pennivorans (strain DSM 9078 / Ven5) RepID=H9UBL5_FERPD
Fe2+ transport system protein A; K04758 ferrous iron transport protein A
Fe2+ transport system protein A {ECO:0000313|EMBL:AFG34908.1}; TaxID=771875 species="Bacteria; Thermotogae; Thermotogales; Fervidobacteriaceae; Fervidobacterium.;" source="Fervidobacterium pennivorans (strain DSM 9078 / Ven5).;"
scnpilot_p_inoc_scaffold_950_curated_15
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16651..18570
DNA (1920bp) protein (640aa)
Ferrous iron transport protein B n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IF43_FLUTR
ferrous iron transport protein B; K04759 ferrous iron transport protein B
Ferrous iron transport protein B {ECO:0000313|EMBL:AEA43517.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_950_curated_16
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

18876..21236
DNA (2361bp) protein (787aa)
Copper-exporting ATPase (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Copper-exporting ATPase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKH9_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_950_curated_17
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21393..21581
DNA (189bp) protein (63aa)
Cytochrome oxidase maturation protein, cbb3-type n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKH7_FLUTR
cytochrome oxidase maturation protein, cbb3-type
Cytochrome oxidase maturation protein, cbb3-type {ECO:0000313|EMBL:AEA45103.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_950_curated_18
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21523..23751
DNA (2229bp) protein (743aa)
Cytochrome c oxidase, cbb3-type, subunit I {ECO:0000313|EMBL:AEA45102.1}; EC=1.9.3.1 {ECO:0000313|EMBL:AEA45102.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
cytochrome c oxidase, cbb3-type subunit I (EC:1.9.3.1); K15862 cytochrome c oxidase cbb3-type subunit I/II [EC:1.9.3.1]
Cytochrome c oxidase, cbb3-type, subunit I n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKH6_FLUTR
scnpilot_p_inoc_scaffold_950_curated_19
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23757..23960
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKH5_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA45101.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_950_curated_20
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

23965..25110
DNA (1146bp) protein (382aa)
Cytochrome c class I n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKH4_FLUTR
cytochrome c class I; K00406 cytochrome c oxidase cbb3-type subunit III
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_950_curated_21
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

25124..26518
DNA (1395bp) protein (465aa)
Cytochrome c oxidase accessory protein CcoG n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKH3_FLUTR
cytochrome c oxidase accessory protein CcoG
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_950_curated_22
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

26530..26949
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKH2_FLUTR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_950_curated_23
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26952..27698
DNA (747bp) protein (249aa)
membrane protein n=1 Tax=Flavobacteriaceae bacterium HQM9 RepID=UPI000248EBC3
hypothetical protein; K09792 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA45097.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_p_inoc_scaffold_950_curated_24
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

27743..28459
DNA (717bp) protein (239aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKI1_FLUTR
Crp/Fnr family transcriptional regulator
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
scnpilot_p_inoc_scaffold_950_curated_25
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28549..30132
DNA (1584bp) protein (528aa)
Glutamate synthase family protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KRE3_SOLCM
glutamate synthase family protein
Glutamate synthase family protein {ECO:0000313|EMBL:AFD07468.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_p_inoc_scaffold_950_curated_26
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30173..30607
DNA (435bp) protein (145aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
Peptidylprolyl isomerase; K03773 FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CER2_9FLAO
scnpilot_p_inoc_scaffold_950_curated_27
unknown

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comp(30758..31306)
DNA (549bp) protein (183aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_950_curated_28
unknown

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comp(31320..31883)
DNA (564bp) protein (188aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_950_curated_29
unknown

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comp(31873..31986)
DNA (114bp) protein (38aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_950_curated_30
unknown

Not on your lists

comp(31940..32461)
DNA (522bp) protein (174aa)

This feature has no annotations

Displaying items 1-30 of 32 in total

View Taxonomy