ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_p_inoc_scaffold_950_curated_23

Organism: scnpilot_dereplicated_Flavobacteriia_1

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 26952..27698

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Flavobacteriaceae bacterium HQM9 RepID=UPI000248EBC3 similarity UNIREF
DB: UNIREF100
  • Identity: 41.2
  • Coverage: 221.0
  • Bit_score: 172
  • Evalue 6.10e-40
hypothetical protein; K09792 hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 36.7
  • Coverage: 245.0
  • Bit_score: 171
  • Evalue 3.30e-40
Uncharacterized protein {ECO:0000313|EMBL:AEA45097.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.7
  • Coverage: 245.0
  • Bit_score: 171
  • Evalue 1.50e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Fluviicola taffensis → Fluviicola → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 747
ATGTGGGCGGTTTATACAAGTAGTCTGATCATTGGTTTAAGCGCCTCGCTGCACTGCCTGGGCATGTGCGGCCCTTTGGTGATGGCAATCCCGATGAAGACGAATAACGTGTATGAACGTTCCCTTGGAATGCTGCAATACCATATCGGGAAAACGTTTACCTATGCGCTGCTCGGCTTACTGGCAGGATTGATCGGGATCAGCCTCCAGACATTCAAATGGATGCAGCTGCTTTCCGTTATAAGTGGTGTGGCCATCGTTTTTTTCGCATGGGCAAAATTCGTCCGCTTTCCATTCGGAAAAAAATTACAGCAATTGTTTATTCGTTTTTCCGGAACGACACTCCGGAATCTGTTTCAGTCCAACATACCATTGAAACCATTGTTTTTTGGGATCATTAACGGACTGCTTCCATGTGGGCTTATCTATATTGCACTTATAAACAGTCTTTTGGCAGGCAGTCCGTTTTCCGGTATGATAGCAATGATTTTTTTCGGTTTGGGAACAGTGCCGGTGCTGACACTTGCCCGCTGGATTTCGGGTAAATTTCAGTGGAGAACCAACCGCTGGACTCCTGTATTGATCACACTGGTGGGATTGATGGTTGTTTTCAGGGGTCTGAACCTGGGAATCCCTTATCTGAGCCCGAAAATCGAAGTACAACAGGCTACAAACGATGTAAAGGAAGAAACGGAAGAAGTCGTCATGAGTTGCTGTCACAAGGGAAAGGCCTGTGAGAAACCTTAA
PROTEIN sequence
Length: 249
MWAVYTSSLIIGLSASLHCLGMCGPLVMAIPMKTNNVYERSLGMLQYHIGKTFTYALLGLLAGLIGISLQTFKWMQLLSVISGVAIVFFAWAKFVRFPFGKKLQQLFIRFSGTTLRNLFQSNIPLKPLFFGIINGLLPCGLIYIALINSLLAGSPFSGMIAMIFFGLGTVPVLTLARWISGKFQWRTNRWTPVLITLVGLMVVFRGLNLGIPYLSPKIEVQQATNDVKEETEEVVMSCCHKGKACEKP*