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SCNpilot_expt_500_bf_scaffold_68_curated

Search features with annotation key words

Displaying items 1-30 of 263 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_68_curated_1
unknown

Not on your lists

comp(337..516)
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_68_curated_2
unknown

Not on your lists

comp(820..1062)
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_68_curated_3
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1281..1679
DNA (399bp) protein (133aa)
response regulator n=1 Tax=Cytophaga aurantiaca RepID=UPI00035F3100
Transcriptional regulator {ECO:0000313|EMBL:KGD68654.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
response regulator receiver protein
SCNpilot_expt_500_bf_scaffold_68_curated_4
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1923..2732)
DNA (810bp) protein (270aa)
Probable oxidoreductase (Probable short-chain dehydrogenase) n=1 Tax=Pedobacter sp. BAL39 RepID=A6E9D9_9SPHI
Probable oxidoreductase (Probable short-chain dehydrogenase) {ECO:0000313|EMBL:EDM37770.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
short-chain dehydrogenase/reductase SDR; K07124
SCNpilot_expt_500_bf_scaffold_68_curated_5
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2778..3491)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FGN2_FLAJ1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ05644.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
SCNpilot_expt_500_bf_scaffold_68_curated_6
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3469..6198)
DNA (2730bp) protein (910aa)
ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
ATP-dependent DNA ligase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X4K9_FLAB3
DNA ligase {ECO:0000313|EMBL:KFE99172.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
SCNpilot_expt_500_bf_scaffold_68_curated_7
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6215..6403)
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000344DFF7
Uncharacterized protein {ECO:0000313|EMBL:KFF73833.1}; TaxID=1517683 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. P1-3.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_68_curated_8
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6447..7055)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00037721F4
Uncharacterized protein {ECO:0000313|EMBL:KFF02678.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_68_curated_9
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7067..9229)
DNA (2163bp) protein (721aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
hydroperoxidase II n=1 Tax=Flavobacterium rivuli RepID=UPI0003688697
SCNpilot_expt_500_bf_scaffold_68_curated_10
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9596..11797
DNA (2202bp) protein (734aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. F52 RepID=J0RJH1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJF99051.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_68_curated_11
unknown

Not on your lists

comp(12198..12719)
DNA (522bp) protein (174aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_68_curated_12
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12945..13490
DNA (546bp) protein (182aa)
AraC family transcriptional regulator n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B41E04
AraC family transcriptional regulator {ECO:0000313|EMBL:KGD68655.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
AraC family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_68_curated_13
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13513..14232
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. F52 RepID=J1KPI6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KDN55469.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
hypothetical protein; K09166 hypothetical protein
SCNpilot_expt_500_bf_scaffold_68_curated_14
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14360..14929
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X132_FLAB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU08145.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_expt_500_bf_scaffold_68_curated_15
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15004..15612
DNA (609bp) protein (203aa)
SET domain-containing protein n=1 Tax=Flavobacterium sp. CF136 RepID=J2JKW1_9FLAO
SET domain-containing protein {ECO:0000313|EMBL:EJL61638.1}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
SET domain-containing protein
SCNpilot_expt_500_bf_scaffold_68_curated_16
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15687..16052
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8R2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF06456.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_68_curated_17
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16184..17179
DNA (996bp) protein (332aa)
PAS domain S-box n=1 Tax=Flavobacterium sp. CF136 RepID=J3BZR9_9FLAO
PAS domain S-box {ECO:0000313|EMBL:EJL61169.1}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
putative PAS/PAC sensor protein
SCNpilot_expt_500_bf_scaffold_68_curated_18
unknown

Not on your lists

comp(17051..17341)
DNA (291bp) protein (97aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_68_curated_19
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18013..18759)
DNA (747bp) protein (249aa)
NmrA family transcriptional regulator n=1 Tax=Dyadobacter beijingensis RepID=UPI000374D1D7
NmrA family transcriptional regulator {ECO:0000313|EMBL:KDN54589.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
NmrA family protein
SCNpilot_expt_500_bf_scaffold_68_curated_20
unknown

Not on your lists

18791..18880
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_68_curated_21
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18898..19797)
DNA (900bp) protein (300aa)
Transcriptional regulator, AraC family n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IGA7_FLUTR
Uncharacterized protein {ECO:0000313|EMBL:KDN54588.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
AraC family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_68_curated_22
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

20519..21709
DNA (1191bp) protein (397aa)
phage integrase n=1 Tax=Pedobacter agri RepID=UPI00029B3587
xerD; integrase/recombinase xerD-like protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_expt_500_bf_scaffold_68_curated_23
unknown

Not on your lists

comp(21662..21778)
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_68_curated_24
unknown

Not on your lists

22027..22761
DNA (735bp) protein (245aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_68_curated_25
unidentified eubacterium SCB49, Bacteroidetes, Bacteria

Not on your lists

22892..24703
DNA (1812bp) protein (604aa)
Putative uncharacterized protein n=1 Tax=unidentified eubacterium SCB49 RepID=A6EMS5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDM44941.1}; TaxID=50743 species="Bacteria; Bacteroidetes; environmental samples.;" source="unidentified eubacterium SCB49.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_68_curated_26
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24823..25614
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FDX4_FLAJ1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ06589.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
SCNpilot_expt_500_bf_scaffold_68_curated_27
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25616..28762
DNA (3147bp) protein (1049aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FDX5_FLAJ1
DEAD/DEAH box helicase
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:ABQ06590.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
SCNpilot_expt_500_bf_scaffold_68_curated_28
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28849..30531)
DNA (1683bp) protein (561aa)
hypothetical protein n=1 Tax=Capnocytophaga cynodegmi RepID=UPI000361564C
Tax=GWF2_Bacteroidetes_33_38_curated
SCNpilot_expt_500_bf_scaffold_68_curated_29
unknown

Not on your lists

comp(30543..31316)
DNA (774bp) protein (258aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_68_curated_30
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31716..32489
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Vibrio cyclitrophicus RepID=UPI00031941BF
hypothetical protein
Tax=DS1215_Halomonas_54_146
Displaying items 1-30 of 263 in total

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