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SCNpilot_expt_500_bf_scaffold_88_curated_21

Organism: scnpilot_dereplicated_Flavobacterium_1

near complete RP 53 / 55 MC: 2 BSCG 51 / 51 ASCG 15 / 38
Location: 20025..20864

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00037AD121 similarity UNIREF
DB: UNIREF100
  • Identity: 52.6
  • Coverage: 270.0
  • Bit_score: 282
  • Evalue 3.60e-73
Mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:KGO94096.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.3
  • Coverage: 254.0
  • Bit_score: 286
  • Evalue 4.50e-74
mechanosensitive ion channel MscS; K03442 small conductance mechanosensitive channel similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 257.0
  • Bit_score: 252
  • Evalue 1.20e-64

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Taxonomy

Flavobacterium subsaxonicum → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 840
ATGGAAACCTTGAACCAATATTTCCAAAAGGCTGTTCATACCACAACGGCTTTTCTTCCACATTTACTATCAGCTATTATTACACTTGTAGTAGGATTCATAATTATCCGGCTTTTCCGGAAATTTATGATGAGGCTCATTGAGAAGAAACGTTTTGACGCTACACTTCTTAAATTCGTAATGGATGTGGCAGTATGGACAATGCGTGCGCTGCTCTTTGTGAGTATTATTACCAAACTTGGTGTAGAAACATCAGCTTTTGTAGCGGCTATTGGAGCAGCTGGTCTTGCTATTGGACTTTCACTTCAGGGTTCCTTATCTAACTTTGCCGGCGGTTTGCTGATTATTCTTTTTAAACCGCTACGGGTTGGTGATTATGTGGAAGCCCAGGGAGAAGCAGGAACAGTGGCTGCAATTTTTATTTTTAGCACAAAAATCATTACCGGAAACAATCAATCCATCTACCTTCCAAACGGAGCCTTGTCTAATGGAATTATCAGAAACTTTTCAAAGGAAAAGTTACGCCGTGCCGAAATTACGCTGAGTGTGAATCATGACAGTGATATTTCGCTGGTAAAGGCGCTATTGTTTAATGTTATACGTTCTGACAAAAGAATACTTCAACTGCCTGAACCTGCGGTTATGATTAAAGACATTACTGCAGATGCGCTGCTGCTGTCTGTATTGATGTGGACAACAAACGAAGACTACGGATGGGTTGTCTCTGACTTTTTGGAAAATATTAAAAAATCGTTTAAAGAACAGGGCATTAGCAATCCGGCTCCCAAACGCGAGATTATTATTGAAATTAAAAACTACCGGGATACAAAAGAGAAATAA
PROTEIN sequence
Length: 280
METLNQYFQKAVHTTTAFLPHLLSAIITLVVGFIIIRLFRKFMMRLIEKKRFDATLLKFVMDVAVWTMRALLFVSIITKLGVETSAFVAAIGAAGLAIGLSLQGSLSNFAGGLLIILFKPLRVGDYVEAQGEAGTVAAIFIFSTKIITGNNQSIYLPNGALSNGIIRNFSKEKLRRAEITLSVNHDSDISLVKALLFNVIRSDKRILQLPEPAVMIKDITADALLLSVLMWTTNEDYGWVVSDFLENIKKSFKEQGISNPAPKREIIIEIKNYRDTKEK*