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SCNpilot_cont_1000_p_scaffold_692_curated

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_692_curated_1
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(302..1528)
DNA (1227bp) protein (409aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02007}; TaxID=1076588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
tyrS; tyrosyl-tRNA synthetase; K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1]
Tyrosine--tRNA ligase n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G125_9GAMM
SCNpilot_cont_1000_p_scaffold_692_curated_2
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1720..3126
DNA (1407bp) protein (469aa)
Peptidase M23 n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BZ62_NITHN
peptidase M23
Peptidase M23 {ECO:0000313|EMBL:ADE14275.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
SCNpilot_cont_1000_p_scaffold_692_curated_3
unknown

Not on your lists

3274..4353
DNA (1080bp) protein (360aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_692_curated_4
R_Gammaproteobacteria_38_14, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4419..4820)
DNA (402bp) protein (134aa)
Iron-sulfur cluster insertion protein ErpA n=1 Tax=uncultured bacterium RepID=K1ZH56_9BACT
iron-sulfur cluster insertion protein ErpA; K15724 iron-sulfur cluster insertion protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_38_14_curated
SCNpilot_cont_1000_p_scaffold_692_curated_5
unknown

Not on your lists

comp(4886..5545)
DNA (660bp) protein (220aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_692_curated_6
Legionella oakridgensis, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5908..7158)
DNA (1251bp) protein (417aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=1274403 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella oakridgensis RV-2-2007.;"
proA; gamma-glutamylphosphate reductase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Legionella pneumophila subsp. pneumophila RepID=I7HL11_LEGPN
SCNpilot_cont_1000_p_scaffold_692_curated_7
Legionella fallonii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7161..8255)
DNA (1095bp) protein (365aa)
Glutamate 5-kinase {ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|SAAS:SAAS00186442};; TaxID=1212491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella fallonii LLAP-10.;"
glutamate-5-kinase; K00931 glutamate 5-kinase [EC:2.7.2.11]
hypothetical protein n=1 Tax=Legionella tunisiensis RepID=UPI0003143E3F
SCNpilot_cont_1000_p_scaffold_692_curated_8
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8252..9001)
DNA (750bp) protein (250aa)
Putative uncharacterized protein n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2S8Y3_HAHCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC32891.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis (strain KCTC 2396).;"
SCNpilot_cont_1000_p_scaffold_692_curated_9
Methylophilales bacterium HTCC2181, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9120..9557
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Methylophilales bacterium HTCC2181 RepID=A0P7Z5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EAV47655.1}; TaxID=383631 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; unclassified Methylophilales; OM43 clade.;" source="Methylophilales bacterium HTCC2181.;"
hypothetical protein; K08973 putative membrane protein
SCNpilot_cont_1000_p_scaffold_692_curated_10
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9723..9887)
DNA (165bp) protein (55aa)
Rubredoxin n=3 Tax=Nitrosococcus RepID=D8K9E4_NITWC
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
rubredoxin-type Fe(Cys)4 protein
SCNpilot_cont_1000_p_scaffold_692_curated_11
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10006..10854
DNA (849bp) protein (283aa)
phosphomethylpyrimidine kinase (EC:2.7.4.7); K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
Phosphomethylpyrimidine kinase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GLE2_THISH
Tax=BJP_IG2102_Gammaproteobacteria_62_140
SCNpilot_cont_1000_p_scaffold_692_curated_12
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10950..12230
DNA (1281bp) protein (427aa)
hemL; glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8); K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Marinobacterium rhizophilum RepID=UPI00035E65D2
Tax=CG_Thiomicrospira_01
SCNpilot_cont_1000_p_scaffold_692_curated_13
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12357..13865
DNA (1509bp) protein (503aa)
Aminoglycoside phosphotransferase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BUN2_NITHN
aminoglycoside phosphotransferase; K07028
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ADE13432.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
SCNpilot_cont_1000_p_scaffold_692_curated_14
Vibrio harveyi, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13932..14681)
DNA (750bp) protein (250aa)
Sugar fermentation stimulation protein homolog n=1 Tax=Vibrio harveyi 1DA3 RepID=D0XC64_VIBHA
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=673519 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio harveyi 1DA3.;"
sugar fermentation stimulation protein A; K06206 sugar fermentation stimulation protein A
SCNpilot_cont_1000_p_scaffold_692_curated_15
GWC1_Acinetobacter_38_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15013..15516
DNA (504bp) protein (168aa)
RNA polymerase-binding transcription factor DksA n=4 Tax=Acinetobacter junii RepID=N8ZJ15_ACIJU
dksA; DnaK suppressor protein; K06204 DnaK suppressor protein
Tax=GWC1_Acinetobacter_38_13_curated
SCNpilot_cont_1000_p_scaffold_692_curated_16
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15554..16201
DNA (648bp) protein (216aa)
P-nitrobenzoate reductase NfnB n=1 Tax=Cycloclasticus pugetii RepID=UPI0003822621
Nitroreductase
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
SCNpilot_cont_1000_p_scaffold_692_curated_17
unknown

Not on your lists

16194..16487
DNA (294bp) protein (98aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_692_curated_18
unknown

Not on your lists

comp(16539..17009)
DNA (471bp) protein (157aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_692_curated_19
Halorhodospira halophila, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17101..17646)
DNA (546bp) protein (182aa)
Polyhydroxyalkonate synthesis repressor, PhaR n=1 Tax=Halorhodospira halophila (strain DSM 244 / SL1) RepID=A1WZ58_HALHL
polyhydroxyalkonate synthesis repressor PhaR
Polyhydroxyalkonate synthesis repressor, PhaR {ECO:0000313|EMBL:ABM62970.1}; TaxID=349124 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halophila (strain DSM 244 / SL1) (Ectothiorhodospira; halophila (strain DSM 244 / SL1)).;"
SCNpilot_cont_1000_p_scaffold_692_curated_20
Marinobacterium sp. AK27, Marinobacterium, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17671..18417)
DNA (747bp) protein (249aa)
Acetoacetyl-CoA reductase {ECO:0000313|EMBL:KEA65296.1}; EC=1.1.1.36 {ECO:0000313|EMBL:KEA65296.1};; TaxID=1232683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacterium.;" source="Marinobacterium sp. AK27.;"
phbB; acetoacetyl-CoA reductase (EC:1.1.1.36); K00023 acetoacetyl-CoA reductase [EC:1.1.1.36]
3-ketoacyl-ACP reductase n=1 Tax=gamma proteobacterium HIMB30 RepID=UPI000262C929
SCNpilot_cont_1000_p_scaffold_692_curated_21
Allochromatium vinosum, Allochromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18466..19650)
DNA (1185bp) protein (395aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA acetyltransferase; EC=2.3.1.9;; Acetoacetyl-CoA thiolase; TaxID=572477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium.;" source="Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 /; NCIMB 10441 / D) (Chromatium vinosum).;"
Acetyl-CoA acetyltransferase n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=THIL_ALLVD rbh
SCNpilot_cont_1000_p_scaffold_692_curated_22
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19763..21694)
DNA (1932bp) protein (644aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-Rule:MF_01123};; Acetate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_01123}; Acyl-activating enzyme {ECO:0000256|HAMAP-Rule:MF_01123}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
acs; acetyl-CoA synthetase (EC:6.2.1.1)
Acetyl-coenzyme A synthetase n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AIW3_PSERE
SCNpilot_cont_1000_p_scaffold_692_curated_23
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21946..23544)
DNA (1599bp) protein (533aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbiont Rs2.;"
glucose-6-phosphate isomerase (EC:5.3.1.9); K01810 glucose-6-phosphate isomerase [EC:5.3.1.9]
Glucose-6-phosphate isomerase n=1 Tax=Osedax symbiont Rs2 RepID=S6I221_9GAMM
SCNpilot_cont_1000_p_scaffold_692_curated_24
Halomonas sp. A3H3, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23541..24044)
DNA (504bp) protein (168aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:CDG52149.1}; EC=2.7.6.3 {ECO:0000313|EMBL:CDG52149.1};; TaxID=1346287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. A3H3.;"
folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3); K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Halomonas sp. A3H3 RepID=T2L5D8_9GAMM
SCNpilot_cont_1000_p_scaffold_692_curated_25
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24134..25489)
DNA (1356bp) protein (452aa)
Poly(A) polymerase I {ECO:0000256|HAMAP-Rule:MF_00957}; Short=PAP I {ECO:0000256|HAMAP-Rule:MF_00957};; EC=2.7.7.19 {ECO:0000256|HAMAP-Rule:MF_00957};; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
Poly(A) polymerase I n=1 Tax=Thiocapsa marina 5811 RepID=F9UAL3_9GAMM
poly(A) polymerase
SCNpilot_cont_1000_p_scaffold_692_curated_26
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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25826..26461
DNA (636bp) protein (212aa)
caffeoyl-CoA O-methyltransferase (EC:2.1.1.104)
O-methyltransferase family protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YVV2_9BACT
Tax=RBG_16_Gamma2_64_11_curated
SCNpilot_cont_1000_p_scaffold_692_curated_27
Endozoicomonas montiporae, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26522..27070)
DNA (549bp) protein (183aa)
Superoxide dismutase [Cu-Zn] {ECO:0000256|RuleBase:RU000393}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000393};; TaxID=1027273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Endozoicomonas.;" source="Endozoicomonas montiporae.;"
Cu/Zn superoxide dismutase n=1 Tax=Acinetobacter sp. P8-3-8 RepID=UPI0002485526
sodC; superoxide dismutase
SCNpilot_cont_1000_p_scaffold_692_curated_28
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

27250..28077
DNA (828bp) protein (276aa)
Pseudouridine synthase, RluA family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XHZ1_9BACT
Pseudouridine synthase, RluA family {ECO:0000313|EMBL:EEF60484.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_692_curated_29
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28376..28918
DNA (543bp) protein (181aa)
Inorganic pyrophosphatase n=4 Tax=Alteromonas macleodii RepID=J9Y133_ALTMA
inorganic pyrophosphatase
Tax=CG_Hydro_01
SCNpilot_cont_1000_p_scaffold_692_curated_30
unknown

Not on your lists

29117..30043
DNA (927bp) protein (309aa)

This feature has no annotations

Displaying items 1-30 of 45 in total

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