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scnpilot_p_inoc_scaffold_713_curated

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Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_713_curated_1
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..105
DNA (105bp) protein (35aa)
respiratory nitrate reductase subunit alpha apoprotein (EC:1.7.99.4); K00370 nitrate reductase 1, alpha subunit [EC:1.7.99.4]
nitrate reductase A subunit alpha n=1 Tax=Comamonas sp. B-9 RepID=UPI0003958A39
Tax=BJP_08E140C01_Burkholderiales_65_30
fragment, connects to scnpilot_p_inoc_scaffold_33198_curated_1 Rose Kantor (12/3/15)
scnpilot_p_inoc_scaffold_713_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

124..486
DNA (363bp) protein (121aa)
Cupin n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGU6_9BURK
Cupin {ECO:0000313|EMBL:EIK88436.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
cupin
scnpilot_p_inoc_scaffold_713_curated_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

483..2015
DNA (1533bp) protein (511aa)
Respiratory nitrate reductase subunit beta {ECO:0000313|EMBL:EIK88435.1}; EC=1.7.99.4 {ECO:0000313|EMBL:EIK88435.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
respiratory nitrate reductase subunit beta (EC:1.7.99.4); K00371 nitrate reductase 1, beta subunit [EC:1.7.99.4]
Respiratory nitrate reductase subunit beta n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGU5_9BURK
scnpilot_p_inoc_scaffold_713_curated_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2017..2709
DNA (693bp) protein (231aa)
Nitrate reductase molybdenum cofactor assembly chaperone n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGU4_9BURK
Nitrate reductase molybdenum cofactor assembly chaperone {ECO:0000313|EMBL:EIK88434.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
respiratory nitrate reductase chaperone NarJ; K00373 nitrate reductase 1, delta subunit
scnpilot_p_inoc_scaffold_713_curated_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2706..3413
DNA (708bp) protein (236aa)
Respiratory nitrate reductase subunit gamma {ECO:0000313|EMBL:EIK88433.1}; EC=1.7.99.4 {ECO:0000313|EMBL:EIK88433.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
respiratory nitrate reductase subunit gamma (EC:1.7.99.4); K00374 nitrate reductase 1, gamma subunit [EC:1.7.99.4]
Respiratory nitrate reductase subunit gamma n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGU3_9BURK
scnpilot_p_inoc_scaffold_713_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3417..4268
DNA (852bp) protein (284aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00015172}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00015172};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
PpiC-type peptidyl-prolyl cis-trans isomerase; K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGU2_9BURK
scnpilot_p_inoc_scaffold_713_curated_7
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4366..7980
DNA (3615bp) protein (1205aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
ribonucleoside-diphosphate reductase (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Ribonucleoside-diphosphate reductase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AZZ6_DELSC
scnpilot_p_inoc_scaffold_713_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7973..9268
DNA (1296bp) protein (432aa)
FAD dependent oxidoreductase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGT9_9BURK
FAD dependent oxidoreductase {ECO:0000313|EMBL:EIK88429.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
FAD dependent oxidoreductase
scnpilot_p_inoc_scaffold_713_curated_9
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9276..10769)
DNA (1494bp) protein (498aa)
Xanthine permease n=1 Tax=Thauera phenylacetica B4P RepID=N7A0V2_9RHOO
xanthine permease; K03458 nucleobase:cation symporter-2, NCS2 family
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
scnpilot_p_inoc_scaffold_713_curated_10
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10980..11903)
DNA (924bp) protein (308aa)
2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60); K00042 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
2-hydroxy-3-oxopropionate reductase n=2 Tax=Alicycliphilus denitrificans RepID=E8TXP9_ALIDB
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:GAO24397.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_p_inoc_scaffold_713_curated_11
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11914..12708)
DNA (795bp) protein (265aa)
hydroxypyruvate isomerase (EC:5.3.1.22); K01816 hydroxypyruvate isomerase [EC:5.3.1.22]
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Hydroxypyruvate isomerase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GDT8_ALIDK
scnpilot_p_inoc_scaffold_713_curated_12
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12744..14540)
DNA (1797bp) protein (599aa)
Glyoxylate carboligase id=4395490 bin=GWA2_Polynucleobacter_45_21 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria
acetolactate synthase, large subunit, biosynthetic type
Tax=GWA2_Polynucleobacter_45_21_curated
scnpilot_p_inoc_scaffold_713_curated_13
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14681..15571
DNA (891bp) protein (297aa)
Transcriptional regulator, LysR family n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y7T7_LEPCP
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACB32535.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
scnpilot_p_inoc_scaffold_713_curated_14
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15636..16361
DNA (726bp) protein (242aa)
Transcriptional regulator, GntR family n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SDV1_METPP
GntR family transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
scnpilot_p_inoc_scaffold_713_curated_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16465..17439
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGT8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK88428.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
tctC; extracytoplasmic binding receptor
scnpilot_p_inoc_scaffold_713_curated_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17450..19519
DNA (2070bp) protein (690aa)
Ser/Thr protein phosphatase family protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGT7_9BURK
Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:EIK88427.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
calcineurin-like phosphoesterase family protein 5
scnpilot_p_inoc_scaffold_713_curated_17
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19564..20508
DNA (945bp) protein (315aa)
Transcriptional regulator, LysR family n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGN1_9BURK
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EIK88371.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
transcriptional regulator
scnpilot_p_inoc_scaffold_713_curated_18
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20513..21016
DNA (504bp) protein (168aa)
Thioredoxin-like protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUY8_9BURK
Thioredoxin-like protein {ECO:0000313|EMBL:EIK93028.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
thioredoxin-like protein
scnpilot_p_inoc_scaffold_713_curated_19
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21021..21845)
DNA (825bp) protein (275aa)
Phosphonate ABC transporter permease n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGN3_9BURK
Phosphonate ABC transporter permease {ECO:0000313|EMBL:EIK88373.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
phnE2; phosphonate ABC transporter permease; K02042 phosphonate transport system permease protein
scnpilot_p_inoc_scaffold_713_curated_20
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21842..22798)
DNA (957bp) protein (319aa)
Phosphonate ABC transporter, periplasmic phosphonate binding protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGN4_9BURK
Phosphonate ABC transporter, periplasmic phosphonate binding protein {ECO:0000313|EMBL:EIK88374.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
phosphonate ABC transporter substrate-binding protein; K02044 phosphonate transport system substrate-binding protein
scnpilot_p_inoc_scaffold_713_curated_21
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22847..23680)
DNA (834bp) protein (278aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
phosphonate ABC transporter ATP-binding protein; K02041 phosphonate transport system ATP-binding protein [EC:3.6.3.28]
Phosphonates ABC transporter, ATP-binding protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGN5_9BURK
scnpilot_p_inoc_scaffold_713_curated_22
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23845..25137)
DNA (1293bp) protein (431aa)
class III aminotransferase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
Class III aminotransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGN8_9BURK
Class III aminotransferase {ECO:0000313|EMBL:EIK88378.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_713_curated_23
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25134..27131)
DNA (1998bp) protein (666aa)
Acetoacetyl-CoA synthase {ECO:0000313|EMBL:EIK88385.1}; EC=6.2.1.16 {ECO:0000313|EMBL:EIK88385.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
acetoacetyl-CoA synthase; K01907 acetoacetyl-CoA synthetase [EC:6.2.1.16]
Acetoacetyl-CoA synthase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGP5_9BURK
scnpilot_p_inoc_scaffold_713_curated_24
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27201..27902
DNA (702bp) protein (234aa)
Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGP6_9BURK
Putative transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:EIK88386.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Crp/Fnr family transcriptional regulator
scnpilot_p_inoc_scaffold_713_curated_25
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27925..28842)
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000371AB51
Transcriptional regulator {ECO:0000313|EMBL:EJL71355.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
Putative transcriptional regulator of the LysR family (gstR)
scnpilot_p_inoc_scaffold_713_curated_26
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28942..29913
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2KDW0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL71353.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
scnpilot_p_inoc_scaffold_713_curated_27
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29927..31321
DNA (1395bp) protein (465aa)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase n=1 Tax=Variovorax sp. CF313 RepID=J3CGR3_9BURK
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000313|EMBL:EJL71354.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
class III aminotransferase
scnpilot_p_inoc_scaffold_713_curated_28
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31318..33585
DNA (2268bp) protein (756aa)
hypothetical protein; K03418 N,N-dimethylformamidase [EC:3.5.1.56]
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00035FC492
Uncharacterized protein {ECO:0000313|EMBL:EJL71352.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
scnpilot_p_inoc_scaffold_713_curated_29
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33582..34277
DNA (696bp) protein (232aa)
enoyl-CoA hydratase; K15866 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
Crotonase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGP7_9BURK
Crotonase {ECO:0000313|EMBL:EIK88387.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_713_curated_30
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34425..35282)
DNA (858bp) protein (286aa)
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:EIK91266.1}; EC=1.1.1.60 {ECO:0000313|EMBL:EIK91266.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60); K00042 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
2-hydroxy-3-oxopropionate reductase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPX6_9BURK
Displaying items 1-30 of 40 in total

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