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scnpilot_p_inoc_scaffold_3544_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3544_curated_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..163)
DNA (162bp) protein (54aa)
3-methyladenine DNA glycosylase {ECO:0000313|EMBL:EIK89244.1}; EC=3.2.2.20 {ECO:0000313|EMBL:EIK89244.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
3-methyladenine DNA glycosylase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ54_9BURK
tag; 3-methyladenine DNA glycosylase
scnpilot_p_inoc_scaffold_3544_curated_2
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(173..460)
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Thalassospira lucentensis RepID=UPI0003B6C3AD
Putative uncharacterized protein {ECO:0000313|EMBL:EEP72916.1}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
YCII-like domain-containing protein
scnpilot_p_inoc_scaffold_3544_curated_3
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(480..1073)
DNA (594bp) protein (198aa)
Transcriptional regulator, TetR family n=1 Tax=Variovorax paradoxus B4 RepID=T1XMP1_VARPD
transcriptional regulator, TetR family
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AGU53554.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
scnpilot_p_inoc_scaffold_3544_curated_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1170..2471)
DNA (1302bp) protein (434aa)
Trap c4-dicarboxylate transport system permease dctm subunit n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ53_9BURK
Trap c4-dicarboxylate transport system permease dctm subunit {ECO:0000313|EMBL:EIK89243.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
TRAP dicarboxylate transporter subunit DctM
scnpilot_p_inoc_scaffold_3544_curated_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2488..3033)
DNA (546bp) protein (182aa)
TRAP transporter, DctQ-like membrane protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ52_9BURK
TRAP transporter, DctQ-like membrane protein {ECO:0000313|EMBL:EIK89242.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_3544_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3149..4102
DNA (954bp) protein (318aa)
LysR family transcripitonal regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ51_9BURK
LysR family transcripitonal regulator {ECO:0000313|EMBL:EIK89241.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3544_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4132..5190)
DNA (1059bp) protein (353aa)
Putative trap dicarboxylate transporter-dctp subunit n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ50_9BURK
Putative trap dicarboxylate transporter-dctp subunit {ECO:0000313|EMBL:EIK89240.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
dctP3; TRAP transporter DctP subunit
scnpilot_p_inoc_scaffold_3544_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5241..6464)
DNA (1224bp) protein (408aa)
phenoxybenzoate dioxygenase subunit alpha (EC:1.14.12.-); K03384 [EC:1.14.12.-]
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ49_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89239.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_3544_curated_9
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6668..9403
DNA (2736bp) protein (912aa)
cation-transporting P-type ATPase; K01552 [EC:3.6.3.-]
Cation transportingP-type ATPase n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YFJ6_9RHOO
Carbonate dehydratase {ECO:0000313|EMBL:EXU81883.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;"
scnpilot_p_inoc_scaffold_3544_curated_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9378..9545)
DNA (168bp) protein (56aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838}; Short=NAPRTase {ECO:0000256|HAMAP-Rule:MF_00570};; EC=6.3.4.21 {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
nicotinate phosphoribosyltransferase; K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11]
Nicotinate phosphoribosyltransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ48_9BURK
Displaying 10 items

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