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scnpilot_p_inoc_scaffold_1818_curated

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1818_curated_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..709)
DNA (708bp) protein (236aa)
Inner-membrane translocator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIJ7_9BURK
Inner-membrane translocator {ECO:0000313|EMBL:EIK89037.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
scnpilot_p_inoc_scaffold_1818_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(729..1940)
DNA (1212bp) protein (404aa)
ABC transporter substrate-binding protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIJ8_9BURK
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EIK89038.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
scnpilot_p_inoc_scaffold_1818_curated_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1999..2706)
DNA (708bp) protein (236aa)
ABC transporter-like protein {ECO:0000313|EMBL:EIK89039.1}; EC=3.6.1.3 {ECO:0000313|EMBL:EIK89039.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ABC transporter-like protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIJ9_9BURK
ABC transporter related protein
scnpilot_p_inoc_scaffold_1818_curated_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2706..3491)
DNA (786bp) protein (262aa)
ABC transporter-like protein {ECO:0000313|EMBL:EIK89040.1}; EC=3.6.1.3 {ECO:0000313|EMBL:EIK89040.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
branched-chain amino acid transport system permease, ATP binding component (EC:3.6.3.17); K01995 branched-chain amino acid transport system ATP-binding protein
ABC transporter-like protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIK0_9BURK
scnpilot_p_inoc_scaffold_1818_curated_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3684..4490
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIK1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89041.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1818_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4524..6803)
DNA (2280bp) protein (760aa)
Patatin n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIK2_9BURK
Patatin {ECO:0000313|EMBL:EIK89042.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
patatin; K07001 NTE family protein
scnpilot_p_inoc_scaffold_1818_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6910..7674
DNA (765bp) protein (255aa)
Unsaturated acyl-CoA hydratase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIK3_9BURK
Unsaturated acyl-CoA hydratase {ECO:0000313|EMBL:EIK89043.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
unsaturated acyl-CoA hydratase
scnpilot_p_inoc_scaffold_1818_curated_8
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7715..10465)
DNA (2751bp) protein (917aa)
Na+/solute symporter n=1 Tax=alpha proteobacterium BAL199 RepID=A8TWD3_9PROT
Na+/solute symporter
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
scnpilot_p_inoc_scaffold_1818_curated_9
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10465..10710)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TJ32_TISMK
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
scnpilot_p_inoc_scaffold_1818_curated_10
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10728..11099)
DNA (372bp) protein (124aa)
Protein containing response regulator domain, but no DNA binding domain n=1 Tax=alpha proteobacterium BAL199 RepID=A8TWD1_9PROT
arlR; protein containing response regulator domain, but no DNA binding domain
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
scnpilot_p_inoc_scaffold_1818_curated_11
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11145..12746)
DNA (1602bp) protein (534aa)
Transcriptional regulator, XRE family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TWE1_9PROT
XRE family transcriptional regulator protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
scnpilot_p_inoc_scaffold_1818_curated_12
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12977..14341
DNA (1365bp) protein (455aa)
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein n=2 Tax=Bradyrhizobiaceae RepID=F7QJZ7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CDX39856.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
twin-arginine translocation pathway signal
scnpilot_p_inoc_scaffold_1818_curated_13
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14423..15298
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NRY0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CDX39852.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
scnpilot_p_inoc_scaffold_1818_curated_14
unknown

Not on your lists

comp(15647..15898)
DNA (252bp) protein (84aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1818_curated_15
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16387..16980
DNA (594bp) protein (198aa)
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QLG4_9BRAD
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:CDX39850.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
ABC transporter
scnpilot_p_inoc_scaffold_1818_curated_16
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17042..17740
DNA (699bp) protein (233aa)
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YIB3_9BRAD
High-affinity branched-chain amino acid transport ATP-binding protein BraG {ECO:0000313|EMBL:CDX39848.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein; K01996 branched-chain amino acid transport system ATP-binding protein
scnpilot_p_inoc_scaffold_1818_curated_17
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17774..19102
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIK5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89045.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1818_curated_18
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19099..19383)
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y5G2_LEPCP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB33550.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
scnpilot_p_inoc_scaffold_1818_curated_19
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19447..19803
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIK7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89047.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1818_curated_20
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19902..20318
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIK8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89048.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1818_curated_21
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20361..20780
DNA (420bp) protein (140aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIK9_9BURK
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EIK89049.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Glyoxalase/bleomycin resistance protein/dioxygenase
scnpilot_p_inoc_scaffold_1818_curated_22
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20794..21051
DNA (258bp) protein (86aa)
Putative sigma factor n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIL0_9BURK
Putative sigma factor {ECO:0000313|EMBL:EIK89050.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
putative sigma factor
Displaying 22 items

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