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scnpilot_p_inoc_scaffold_2479_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2479_curated_1
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..291
DNA (291bp) protein (97aa)
ferredoxin n=1 Tax=Comamonas sp. B-9 RepID=UPI000395C597
Uncharacterized protein {ECO:0000313|EMBL:EWS63560.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
ferredoxin
scnpilot_p_inoc_scaffold_2479_curated_2
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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288..569
DNA (282bp) protein (94aa)
ferredoxin n=1 Tax=Hoeflea sp. 108 RepID=UPI00037BF0A8
Ferredoxin {ECO:0000313|EMBL:EWS63559.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
ferredoxin
scnpilot_p_inoc_scaffold_2479_curated_3
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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575..1330
DNA (756bp) protein (252aa)
Putative sulfite exporter, TauE/SafE family n=1 Tax=Variovorax paradoxus B4 RepID=T1XM24_VARPD
putative sulfite exporter, TauE/SafE family
Putative sulfite exporter, TauE/SafE family {ECO:0000313|EMBL:AGU53359.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
scnpilot_p_inoc_scaffold_2479_curated_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1344..2264
DNA (921bp) protein (307aa)
Putative ornithine cyclodeaminase n=1 Tax=Variovorax paradoxus B4 RepID=T1XL87_VARPD
putative ornithine cyclodeaminase
Putative ornithine cyclodeaminase {ECO:0000313|EMBL:AGU53358.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
scnpilot_p_inoc_scaffold_2479_curated_5
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2365..3018)
DNA (654bp) protein (218aa)
Transcriptional regulator, GntR family n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y0B5_LEPCP
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ACB36594.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
scnpilot_p_inoc_scaffold_2479_curated_6
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3211..4242)
DNA (1032bp) protein (344aa)
Outer membrane protein (Porin) n=1 Tax=Polaromonas sp. CF318 RepID=J3CT27_9BURK
Outer membrane protein (Porin) {ECO:0000313|EMBL:EJL77944.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
porin
scnpilot_p_inoc_scaffold_2479_curated_7
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4281..5810)
DNA (1530bp) protein (510aa)
Conserved hypothetical membrane spanning protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y0C6_LEPCP
hypothetical protein
Conserved hypothetical membrane spanning protein {ECO:0000313|EMBL:ACB36605.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
scnpilot_p_inoc_scaffold_2479_curated_8
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6292..7773
DNA (1482bp) protein (494aa)
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG22939.1}; EC=2.3.2.2 {ECO:0000313|EMBL:AJG22939.1};; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
gamma-glutamyltransferase (EC:2.3.2.2); K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2]
gamma-glutamyltransferase n=1 Tax=Cupriavidus sp. WS RepID=UPI0003696735
scnpilot_p_inoc_scaffold_2479_curated_9
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7809..8429
DNA (621bp) protein (207aa)
glutathione S-transferase domain-containing protein; K00799 glutathione S-transferase [EC:2.5.1.18]
glutathione S-transferase n=1 Tax=Cupriavidus sp. WS RepID=UPI0003649604
Glutathione S-transferase domain {ECO:0000313|EMBL:ACB36607.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
scnpilot_p_inoc_scaffold_2479_curated_10
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8437..10029)
DNA (1593bp) protein (531aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SJ78_METPP
mcp; methyl-accepting chemotaxis sensory transducer; K05874 methyl-accepting chemotaxis protein I, serine sensor receptor
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ABM95617.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
scnpilot_p_inoc_scaffold_2479_curated_11
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10286..11731)
DNA (1446bp) protein (482aa)
Phosphonoacetaldehyde dehydrogenase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UUT6_VARPE
Variovorax paradoxus strain MEDvA23 contig_30, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ31742.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
phosphonoacetaldehyde dehydrogenase
scnpilot_p_inoc_scaffold_2479_curated_12
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11728..12825)
DNA (1098bp) protein (366aa)
Phosphonate metabolism-associated iron-containing alcohol dehydrogenase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UUT5_VARPE
phosphonate metabolism-associated iron-containing alcohol dehydrogenase
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
scnpilot_p_inoc_scaffold_2479_curated_13
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12834..13184)
DNA (351bp) protein (117aa)
Phosphonoacetate hydrolase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UUT4_VARPE
phosphonoacetate hydrolase
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
Displaying 13 items

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