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scnpilot_p_inoc_scaffold_3320_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3320_curated_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..2400)
DNA (2400bp) protein (800aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
DNA gyrase subunit B (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3]
DNA gyrase subunit B n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQN8_9BURK
scnpilot_p_inoc_scaffold_3320_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2480..3586)
DNA (1107bp) protein (369aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
DNA polymerase III subunit beta (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7]
DNA polymerase III subunit beta n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQN7_9BURK
scnpilot_p_inoc_scaffold_3320_curated_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3701..5113)
DNA (1413bp) protein (471aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQN6_9BURK
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
chromosomal replication initiator protein DnaA; K02313 chromosomal replication initiator protein
scnpilot_p_inoc_scaffold_3320_curated_4
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5329..5463
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=6 Tax=Burkholderiales RepID=RL34_RHOFD
rpmH; 50S ribosomal protein L34 RpmH; K02914 large subunit ribosomal protein L34
Tax=CG_Rhodof_02
scnpilot_p_inoc_scaffold_3320_curated_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5486..5890
DNA (405bp) protein (135aa)
Ribonuclease P protein component {ECO:0000256|SAAS:SAAS00143752}; EC=3.1.26.5 {ECO:0000256|SAAS:SAAS00143815};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQN4_9BURK
ribonuclease P domain-containing protein
scnpilot_p_inoc_scaffold_3320_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5880..6170
DNA (291bp) protein (97aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQN3_9BURK
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein; K08998 hypothetical protein
scnpilot_p_inoc_scaffold_3320_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6167..7879
DNA (1713bp) protein (571aa)
Membrane protein insertase YidC n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQN2_9BURK
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
membrane protein insertase, yidc/oxa1 family domain containing; K03217 preprotein translocase subunit YidC
scnpilot_p_inoc_scaffold_3320_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7925..9370
DNA (1446bp) protein (482aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-]
tRNA modification GTPase MnmE n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQN1_9BURK
scnpilot_p_inoc_scaffold_3320_curated_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9427..9969
DNA (543bp) protein (181aa)
Cyclic nucleotide-binding domain-containing protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQN0_9BURK
Cyclic nucleotide-binding domain-containing protein {ECO:0000313|EMBL:EIK91520.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
cyclic nucleotide-binding domain-containing protein
scnpilot_p_inoc_scaffold_3320_curated_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10037..10708
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQM9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91519.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3320_curated_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10736..11281)
DNA (546bp) protein (182aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQM8_9BURK
scnpilot_p_inoc_scaffold_3320_curated_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11318..12313
DNA (996bp) protein (332aa)
KpsF/GutQ family protein {ECO:0000313|EMBL:EIK91516.1}; EC=5.3.1.13 {ECO:0000313|EMBL:EIK91516.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
kpsf/gutq family protein (EC:5.3.1.13); K06041 arabinose-5-phosphate isomerase [EC:5.3.1.13]
KpsF/GutQ family protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQM6_9BURK
scnpilot_p_inoc_scaffold_3320_curated_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12313..12858
DNA (546bp) protein (182aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase {ECO:0000313|EMBL:EIK91515.1}; EC=3.1.3.45 {ECO:0000313|EMBL:EIK91515.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC:3.1.3.45); K03270 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQM5_9BURK
scnpilot_p_inoc_scaffold_3320_curated_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12855..13535
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQM4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91514.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; K11719 lipopolysaccharide export system protein LptC
scnpilot_p_inoc_scaffold_3320_curated_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13532..14326
DNA (795bp) protein (265aa)
Short-chain dehydrogenase/reductase sdr n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQM3_9BURK
Short-chain dehydrogenase/reductase sdr {ECO:0000313|EMBL:EIK91513.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
short-chain dehydrogenase/reductase SDR
scnpilot_p_inoc_scaffold_3320_curated_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14391..14786)
DNA (396bp) protein (132aa)
RNA recognition motif-containing protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQM2_9BURK
RNA recognition motif-containing protein {ECO:0000313|EMBL:EIK91512.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
RNA-binding protein RNP-3
scnpilot_p_inoc_scaffold_3320_curated_17
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15139..15975
DNA (837bp) protein (279aa)
Homoserine O-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.31 {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070942};; Homoserine O-trans-acetylase {ECO:0000256|HAMAP-Rule:MF_00296}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
metX; homoserine O-acetyltransferase MetX (EC:2.3.1.31)
Homoserine O-acetyltransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQM1_9BURK
Displaying 17 items

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