ggKbase home page

scnpilot_p_inoc_scaffold_1635_curated

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1635_curated_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..813
DNA (813bp) protein (271aa)
Putative aminotransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUU8_9BURK
Putative aminotransferase {ECO:0000313|EMBL:EIK92988.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
aminotransferase class-III family protein
scnpilot_p_inoc_scaffold_1635_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(817..1398)
DNA (582bp) protein (194aa)
Hemerythrin HHE cation-binding region n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUU9_9BURK
Hemerythrin HHE cation-binding region {ECO:0000313|EMBL:EIK92989.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hemerythrin HHE cation-binding region
scnpilot_p_inoc_scaffold_1635_curated_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1556..1753
DNA (198bp) protein (66aa)
Heavy metal transport/detoxification protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUV0_9BURK
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:EIK92990.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
copper-transporting ATPase; K07213 copper chaperone
scnpilot_p_inoc_scaffold_1635_curated_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1753..2235
DNA (483bp) protein (161aa)
MerR family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUV1_9BURK
MerR family transcriptional regulator {ECO:0000313|EMBL:EIK92991.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
MerR family transcriptional regulator
scnpilot_p_inoc_scaffold_1635_curated_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2281..2889
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUV2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK92992.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1635_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3196..3957
DNA (762bp) protein (254aa)
Probable septum site-determining protein MinC n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUV3_9BURK
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
minC; septum formation inhibitor; K03610 septum site-determining protein MinC
scnpilot_p_inoc_scaffold_1635_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3989..4804
DNA (816bp) protein (272aa)
Site-determining protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUV4_9BURK
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
septum site-determining protein MinD
scnpilot_p_inoc_scaffold_1635_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4808..5068
DNA (261bp) protein (87aa)
Cell division topological specificity factor n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUV5_9BURK
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
cell division topological specificity factor MinE
scnpilot_p_inoc_scaffold_1635_curated_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5248..5499
DNA (252bp) protein (84aa)
Translation initiation factor IF-1 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUV6_9BURK
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
translation initiation factor IF-1; K02518 translation initiation factor IF-1
scnpilot_p_inoc_scaffold_1635_curated_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5628..6146
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUV7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK92997.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1635_curated_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6234..6863
DNA (630bp) protein (210aa)
Lysine exporter protein LysE/YggA n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUV8_9BURK
Lysine exporter protein LysE/YggA {ECO:0000313|EMBL:EIK92998.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
homoserine/homoserine lactone efflux protein; K05834 homoserine/homoserine lactone efflux protein
scnpilot_p_inoc_scaffold_1635_curated_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6879..8177)
DNA (1299bp) protein (433aa)
ndh; NADH dehydrogenase (EC:1.6.99.3); K03885 NADH dehydrogenase [EC:1.6.99.3]
Putative NADH dehydrogenase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ16_9BURK
Putative NADH dehydrogenase {ECO:0000313|EMBL:EIK89206.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_1635_curated_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8262..8582)
DNA (321bp) protein (107aa)
UPF0060 membrane protein Q5W_3819 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ17_9BURK
UPF0060 membrane protein Q5W_3819 {ECO:0000256|HAMAP-Rule:MF_00010}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein; K09771 hypothetical protein
scnpilot_p_inoc_scaffold_1635_curated_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8700..9137
DNA (438bp) protein (146aa)
MerR family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ18_9BURK
MerR family transcriptional regulator {ECO:0000313|EMBL:EIK89208.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
MerR family transcriptional regulator
scnpilot_p_inoc_scaffold_1635_curated_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9139..9594
DNA (456bp) protein (152aa)
gentamicin 3'-N-acetyltransferase (EC:2.3.1.60); K03395 gentamicin 3'-N-acetyltransferase [EC:2.3.1.60]
Gentamicin 3-n-acetyltransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ19_9BURK
Gentamicin 3-n-acetyltransferase {ECO:0000313|EMBL:EIK89209.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_1635_curated_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9613..10173)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ21_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89211.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1635_curated_17
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10210..10560)
DNA (351bp) protein (117aa)
Putative monovalent cation/H+ antiporter subunit G n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ22_9BURK
Putative monovalent cation/H+ antiporter subunit G {ECO:0000313|EMBL:EIK89212.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
phaG; potassium efflux system protein; K05564 multicomponent K+:H+ antiporter subunit G
scnpilot_p_inoc_scaffold_1635_curated_18
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10622..10900)
DNA (279bp) protein (93aa)
PhaF protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ23_9BURK
PhaF protein {ECO:0000313|EMBL:EIK89213.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
phaF; pH adaptation potassium efflux system protein F; K05563 multicomponent K+:H+ antiporter subunit F
scnpilot_p_inoc_scaffold_1635_curated_19
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10959..11507)
DNA (549bp) protein (183aa)
Putative monovalent cation/H+ antiporter subunit E n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ24_9BURK
Putative monovalent cation/H+ antiporter subunit E {ECO:0000313|EMBL:EIK89214.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
phaE; Potassium efflux system protein PhaE; K05562 multicomponent K+:H+ antiporter subunit E
scnpilot_p_inoc_scaffold_1635_curated_20
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11504..13150)
DNA (1647bp) protein (549aa)
Putative monovalent cation/H+ antiporter subunit D n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ25_9BURK
Putative monovalent cation/H+ antiporter subunit D {ECO:0000313|EMBL:EIK89215.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
phaD; putative K+/H+ antiporter subunit D PhaD; K05561 multicomponent K+:H+ antiporter subunit D
scnpilot_p_inoc_scaffold_1635_curated_21
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13245..13589)
DNA (345bp) protein (115aa)
Putative monovalent cation/H+ antiporter subunit C n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ26_9BURK
Putative monovalent cation/H+ antiporter subunit C {ECO:0000313|EMBL:EIK89216.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
phaC; putative K+/H+ antiporter subunit C PhaC; K05560 multicomponent K+:H+ antiporter subunit C
scnpilot_p_inoc_scaffold_1635_curated_22
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13589..16510)
DNA (2922bp) protein (974aa)
Putative monovalent cation/H+ antiporter subunit A {ECO:0000313|EMBL:EIK89217.1}; EC=1.6.5.3 {ECO:0000313|EMBL:EIK89217.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
phaAB; putative K(+)/H(+) antiporter subunit A/B PhaAB (EC:1.6.99.5); K05559 multicomponent K+:H+ antiporter subunit A
Putative monovalent cation/H+ antiporter subunit A n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ27_9BURK
scnpilot_p_inoc_scaffold_1635_curated_23
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16575..17909)
DNA (1335bp) protein (445aa)
Two component, sigma54 specific, transcriptional regulator, Fis family protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ28_9BURK
Two component, sigma54 specific, transcriptional regulator, Fis family protein {ECO:0000313|EMBL:EIK89218.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Response regulator of zinc sigma-54-dependent two-component system
scnpilot_p_inoc_scaffold_1635_curated_24
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17906..18139)
DNA (234bp) protein (78aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Sensor histidine kinase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ29_9BURK
Displaying 24 items

View Taxonomy