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scnpilot_p_inoc_scaffold_1695_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1695_curated_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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72..857
DNA (786bp) protein (262aa)
3'-5' exonuclease n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIZ9_9BURK
3'-5' exonuclease {ECO:0000313|EMBL:EIK89189.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
3'-5' exonuclease; K07501 hypothetical protein
scnpilot_p_inoc_scaffold_1695_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

973..2391
DNA (1419bp) protein (473aa)
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01010}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
rumA; 23S rRNA 5-methyluridine methyltransferase; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ00_9BURK
scnpilot_p_inoc_scaffold_1695_curated_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2489..2833)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ01_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89191.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1695_curated_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2915..3613)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ02_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89192.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1695_curated_5
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3798..4205
DNA (408bp) protein (136aa)
Uncharacterized protein {ECO:0000313|EMBL:KJA09528.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
protein glcG-like
UPI0001DE9534 related cluster id=1265117 bin=GWE1_Burkholderiales_65_30 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
scnpilot_p_inoc_scaffold_1695_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4323..4733)
DNA (411bp) protein (137aa)
Biopolymer transport protein exbd/tolr n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ04_9BURK
Biopolymer transport protein exbd/tolr {ECO:0000313|EMBL:EIK89194.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
putative biopolymer transport protein ExbD/TolR
scnpilot_p_inoc_scaffold_1695_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4738..5484)
DNA (747bp) protein (249aa)
Biopolymer transport protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ05_9BURK
Biopolymer transport protein {ECO:0000313|EMBL:EIK89195.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
tolQ; biopolymer transport protein; K03561 biopolymer transport protein ExbB
scnpilot_p_inoc_scaffold_1695_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5517..6227)
DNA (711bp) protein (237aa)
TonB family protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ06_9BURK
TonB family protein {ECO:0000313|EMBL:EIK89196.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
tonb family protein; K03832 periplasmic protein TonB
scnpilot_p_inoc_scaffold_1695_curated_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6554..6892
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ07_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89197.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1695_curated_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6924..7529
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ08_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89198.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1695_curated_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7562..8497
DNA (936bp) protein (312aa)
MZT family cation ABC transporter periplasmic cation-binding protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ09_9BURK
MZT family cation ABC transporter periplasmic cation-binding protein {ECO:0000313|EMBL:EIK89199.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
putative adhesion protein; K09815 zinc transport system substrate-binding protein
scnpilot_p_inoc_scaffold_1695_curated_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8494..9300
DNA (807bp) protein (269aa)
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EIK89200.1}; EC=3.6.1.3 {ECO:0000313|EMBL:EIK89200.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ABC transporter ATP-binding protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ10_9BURK
cation ABC transporter, MZT family, ATP-binding protein
scnpilot_p_inoc_scaffold_1695_curated_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9359..10264
DNA (906bp) protein (302aa)
ABC transporter permease n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ11_9BURK
ABC transporter permease {ECO:0000313|EMBL:EIK89201.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
cation ABC transporter permease; K09816 zinc transport system permease protein rbh
scnpilot_p_inoc_scaffold_1695_curated_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10261..11202
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ12_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89202.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ABC transporter substrate-binding protein
scnpilot_p_inoc_scaffold_1695_curated_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11207..11896)
DNA (690bp) protein (230aa)
DNA-binding response regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ13_9BURK
DNA-binding response regulator {ECO:0000313|EMBL:EIK89203.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
two component transcriptional regulator; K07664 two-component system, OmpR family, response regulator BaeR
scnpilot_p_inoc_scaffold_1695_curated_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11889..13415)
DNA (1527bp) protein (509aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; Flags: Fragment;; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
sensory histidine kinase in two-component regulatory system with baer; K07642 two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
Periplasmic sensor signal transduction histidine kinase (Fragment) n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ14_9BURK
scnpilot_p_inoc_scaffold_1695_curated_17
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13578..15008
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGX5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK88465.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
secretion protein; K13888 macrolide-specific efflux protein MacA
scnpilot_p_inoc_scaffold_1695_curated_18
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15005..17011
DNA (2007bp) protein (669aa)
Macrolide export ATP-binding/permease protein MacB {ECO:0000256|HAMAP-Rule:MF_01720}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01720};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
transmembrane ATP-binding ABC transporter protein; K05685 macrolide transport system ATP-binding/permease protein [EC:3.6.3.-]
Macrolide export ATP-binding/permease protein macB n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGX6_9BURK
scnpilot_p_inoc_scaffold_1695_curated_19
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17041..17484
DNA (444bp) protein (148aa)
Putative outer membrane efflux protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGX7_9BURK
Putative outer membrane efflux protein {ECO:0000313|EMBL:EIK88467.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
RND efflux system, outer membrane lipoprotein, NodT family
Displaying 19 items

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