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scnpilot_p_inoc_scaffold_1370_curated

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1370_curated_1
unknown

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comp(1..141)
DNA (141bp) protein (47aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1370_curated_2
Medicago truncatula, Medicago, Fabales, rosids, Streptophyta, Viridiplantae

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comp(170..658)
DNA (489bp) protein (163aa)
Thioesterase superfamily protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T0ZF58_9ZZZZ
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KEH15547.1}; Uncharacterized protein {ECO:0000313|EnsemblPlants:KEH15547}; TaxID=3880 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago.;" source="Medicago truncatula (Barrel medic) (Medicago tribuloides).;"
thioesterase superfamily protein
scnpilot_p_inoc_scaffold_1370_curated_3
Medicago truncatula, Medicago, Fabales, rosids, Streptophyta, Viridiplantae

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comp(655..1815)
DNA (1161bp) protein (387aa)
Acyl coenzyme A dehydrogenase n=1 Tax=Roseobacter sp. GAI101 RepID=B7RI62_9RHOB
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KEH15547.1}; Uncharacterized protein {ECO:0000313|EnsemblPlants:KEH15547}; TaxID=3880 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago.;" source="Medicago truncatula (Barrel medic) (Medicago tribuloides).;"
putative acyl-CoA dehydrogenase
scnpilot_p_inoc_scaffold_1370_curated_4
Azotobacter vinelandii, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1920..2381
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00036A2486
regulatory protein, MarR family
Regulatory protein, MarR family {ECO:0000313|EMBL:AGK20108.1}; TaxID=1283331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter vinelandii CA6.;"
scnpilot_p_inoc_scaffold_1370_curated_5
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2509..3498
DNA (990bp) protein (330aa)
Uncharacterized protein n=4 Tax=Delftia RepID=A9BVM2_DELAS
Uncharacterized protein {ECO:0000313|EMBL:GAO20843.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1370_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3566..5200
DNA (1635bp) protein (545aa)
AMP-dependent synthetase and ligase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPG1_9BURK
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EIK91101.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
AMP-dependent synthetase and ligase
scnpilot_p_inoc_scaffold_1370_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5216..5416)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPG0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91100.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_1370_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5523..6188
DNA (666bp) protein (222aa)
FMN-binding negative transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC PF9_9BURK">RepID=I4MPF9_9BURK
FMN-binding negative transcriptional regulator {ECO:0000313|EMBL:EIK91099.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
putative FMN-binding negative transcriptional regulator
scnpilot_p_inoc_scaffold_1370_curated_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6185..7018
DNA (834bp) protein (278aa)
G-D-S-L family lipolytic protein n=1 Tax=Hydrogenophaga sp. PBC PF8_9BURK">RepID=I4MPF8_9BURK
G-D-S-L family lipolytic protein {ECO:0000313|EMBL:EIK91098.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1370_curated_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7043..8176)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC PF6_9BURK">RepID=I4MPF6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91096.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1370_curated_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8267..9652
DNA (1386bp) protein (462aa)
Bifunctional haloalkane dehalogenase/tRNA-specific adenosine deaminase n=1 Tax=Hydrogenophaga sp. PBC PF5_9BURK">RepID=I4MPF5_9BURK
Bifunctional haloalkane dehalogenase/tRNA-specific adenosine deaminase {ECO:0000313|EMBL:EIK91095.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
bifunctional haloalkane dehalogenase/tRNA-specific adenosine deaminase
scnpilot_p_inoc_scaffold_1370_curated_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9649..10596
DNA (948bp) protein (316aa)
muramoyltetrapeptide carboxypeptidase (EC:3.4.17.13); K01297 muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
Muramoyltetrapeptide carboxypeptidase n=1 Tax=Hydrogenophaga sp. PBC PF4_9BURK">RepID=I4MPF4_9BURK
Muramoyltetrapeptide carboxypeptidase {ECO:0000313|EMBL:EIK91094.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_1370_curated_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10681..11016)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC PF3_9BURK">RepID=I4MPF3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91093.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1370_curated_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11305..12255
DNA (951bp) protein (317aa)
Putative adenylate/guanylate cyclase n=1 Tax=Hydrogenophaga sp. PBC PF2_9BURK">RepID=I4MPF2_9BURK
Putative adenylate/guanylate cyclase {ECO:0000313|EMBL:EIK91092.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
adenylate/guanylate cyclase
scnpilot_p_inoc_scaffold_1370_curated_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12362..14851
DNA (2490bp) protein (830aa)
Penicillin amidase n=1 Tax=Hydrogenophaga sp. PBC PF1_9BURK">RepID=I4MPF1_9BURK
Penicillin amidase {ECO:0000313|EMBL:EIK91091.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
peptidase S45 penicillin amidase
scnpilot_p_inoc_scaffold_1370_curated_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14852..15640)
DNA (789bp) protein (263aa)
Arginine/ornithine transport ATP-binding protein aotP {ECO:0000313|EMBL:EIK91090.1}; EC=3.6.3.27 {ECO:0000313|EMBL:EIK91090.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ABC transporter-like protein; K10025 arginine/ornithine transport system ATP-binding protein [EC:3.6.3.-]
Arginine/ornithine transport ATP-binding protein aotP n=1 Tax=Hydrogenophaga sp. PBC PF0_9BURK">RepID=I4MPF0_9BURK
scnpilot_p_inoc_scaffold_1370_curated_17
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15656..16792)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPE9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91089.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
succinylglutamate desuccinylase/aspartoacylase; K06987
scnpilot_p_inoc_scaffold_1370_curated_18
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16803..17516)
DNA (714bp) protein (238aa)
Histidine transport system permease protein hisM n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPE8_9BURK
Histidine transport system permease protein hisM {ECO:0000313|EMBL:EIK91088.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
amino acid ABC transporter permease; K10023 arginine/ornithine transport system permease protein
scnpilot_p_inoc_scaffold_1370_curated_19
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17521..18207)
DNA (687bp) protein (229aa)
Histidine transport system permease protein hisQ n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPE7_9BURK
Histidine transport system permease protein hisQ {ECO:0000313|EMBL:EIK91087.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
amino acid ABC transporter permease; K10024 arginine/ornithine transport system permease protein
scnpilot_p_inoc_scaffold_1370_curated_20
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18231..19076)
DNA (846bp) protein (282aa)
Extracellular solute-binding protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPE6_9BURK
Extracellular solute-binding protein {ECO:0000313|EMBL:EIK91086.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
extracellular solute-binding protein; K10022 arginine/ornithine transport system substrate-binding protein
scnpilot_p_inoc_scaffold_1370_curated_21
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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19339..20160
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y3J9_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG92473.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
scnpilot_p_inoc_scaffold_1370_curated_22
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20223..20789
DNA (567bp) protein (189aa)
Nadph-dependent fmn reductase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPE4_9BURK
Nadph-dependent fmn reductase {ECO:0000313|EMBL:EIK91084.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
NADPH-dependent FMN reductase
scnpilot_p_inoc_scaffold_1370_curated_23
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(20794..21936)
DNA (1143bp) protein (381aa)
heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Heavy metal translocating P-type ATPase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q121P4_POLSJ
Tax=BJP_08E140C01_Burkholderiales_65_30
Displaying 23 items

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