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scnpilot_p_inoc_scaffold_1413_curated

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1413_curated_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..264)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ86_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89276.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1413_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(265..1092)
DNA (828bp) protein (276aa)
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ85_9BURK
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:EIK89275.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
xylose isomerase
scnpilot_p_inoc_scaffold_1413_curated_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1122..1898)
DNA (777bp) protein (259aa)
ABC transporter-like protein {ECO:0000313|EMBL:EIK89274.1}; EC=3.6.1.15 {ECO:0000313|EMBL:EIK89274.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ABC transporter-like protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ84_9BURK
ABC transporter-like protein; K02049 NitT/TauT family transport system ATP-binding protein
scnpilot_p_inoc_scaffold_1413_curated_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1943..2959)
DNA (1017bp) protein (339aa)
Membrane lipoprotein lipid attachment site n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ83_9BURK
Membrane lipoprotein lipid attachment site {ECO:0000313|EMBL:EIK89273.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ABC transporter substrate-binding protein
scnpilot_p_inoc_scaffold_1413_curated_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3021..3797)
DNA (777bp) protein (259aa)
Abc transporter permease protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ82_9BURK
Abc transporter permease protein {ECO:0000313|EMBL:EIK89272.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein; K02050 NitT/TauT family transport system permease protein
scnpilot_p_inoc_scaffold_1413_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3821..4885)
DNA (1065bp) protein (355aa)
Dihydrodipicolinate synthetase family protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ81_9BURK
Dihydrodipicolinate synthetase family protein {ECO:0000313|EMBL:EIK89271.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
dapA; Dihydrodipicolinate synthase
scnpilot_p_inoc_scaffold_1413_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4953..5789)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ80_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89270.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1413_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5776..6855)
DNA (1080bp) protein (360aa)
NAD dependent epimerase/dehydratase family protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ79_9BURK
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EIK89269.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1413_curated_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6985..7635)
DNA (651bp) protein (217aa)
Transcriptional regulator, TetR family n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ78_9BURK
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EIK89268.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
mtrR; transcriptional regulator
scnpilot_p_inoc_scaffold_1413_curated_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7719..8117)
DNA (399bp) protein (133aa)
DoxX family protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ76_9BURK
DoxX family protein {ECO:0000313|EMBL:EIK89266.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
DoxX family protein; K15977 putative oxidoreductase
scnpilot_p_inoc_scaffold_1413_curated_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8249..8755)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ75_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89265.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1413_curated_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8895..9251
DNA (357bp) protein (119aa)
Putative ATPase with chaperone activity n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ74_9BURK
Putative ATPase with chaperone activity {ECO:0000313|EMBL:EIK89264.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1413_curated_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9258..9581)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ73_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89263.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1413_curated_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9674..10261
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ72_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89262.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1413_curated_15
Pandoraea vervacti, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10286..11800
DNA (1515bp) protein (505aa)
type I restriction enzyme M protein; K03427 type I restriction enzyme M protein [EC:2.1.1.72]
Type I restriction enzyme M protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ71_9BURK
Type I restriction-modification protein subunit M {ECO:0000313|EMBL:AJP55821.1}; TaxID=656178 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea vervacti.;"
scnpilot_p_inoc_scaffold_1413_curated_16
Xanthomonas gardneri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11793..13031
DNA (1239bp) protein (413aa)
Restriction endonuclease S subunit n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0C0G8_9XANT
Restriction endonuclease S subunit {ECO:0000313|EMBL:EGD20990.1}; TaxID=925777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas gardneri ATCC 19865.;"
restriction endonuclease S subunit
scnpilot_p_inoc_scaffold_1413_curated_17
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13028..16150
DNA (3123bp) protein (1041aa)
HsdR protein; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3]
HsdR protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ68_9BURK
Tax=BJP_IG2103_Dechloromonas_63_51
scnpilot_p_inoc_scaffold_1413_curated_18
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16176..16679
DNA (504bp) protein (168aa)
Gnat family n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ64_9BURK
Gnat family {ECO:0000313|EMBL:EIK89254.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
putative acetyltransferase
scnpilot_p_inoc_scaffold_1413_curated_19
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16694..17614)
DNA (921bp) protein (307aa)
Transcription regulator protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ63_9BURK
Transcription regulator protein {ECO:0000313|EMBL:EIK89253.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1413_curated_20
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17638..18672)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ62_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89252.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1413_curated_21
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18681..19409)
DNA (729bp) protein (243aa)
ABC transporter {ECO:0000313|EMBL:EIK89251.1}; EC=3.6.1.3 {ECO:0000313|EMBL:EIK89251.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ABC transporter n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ61_9BURK
glutamine transport system ATP-binding protein
scnpilot_p_inoc_scaffold_1413_curated_22
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19406..20062)
DNA (657bp) protein (219aa)
Glutamine ABC transporter permease n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ60_9BURK
Glutamine ABC transporter permease {ECO:0000313|EMBL:EIK89250.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
glnP; glutamine ABC transporter permease; K10037 glutamine transport system permease protein
scnpilot_p_inoc_scaffold_1413_curated_23
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20100..20852)
DNA (753bp) protein (251aa)
Extracellular solute-binding protein family 3 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ59_9BURK
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:EIK89249.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
glnH; glutamine ABC transporter substrate-binding protein; K10036 glutamine transport system substrate-binding protein
scnpilot_p_inoc_scaffold_1413_curated_24
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21035..21616)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ58_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89248.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
flavin reductase domain-containing FMN-binding protein
scnpilot_p_inoc_scaffold_1413_curated_25
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21613..22089)
DNA (477bp) protein (159aa)
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EIK89247.1}; EC=1.13.11.- {ECO:0000313|EMBL:EIK89247.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ57_9BURK
dioxygenase
scnpilot_p_inoc_scaffold_1413_curated_26
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22190..23071
DNA (882bp) protein (294aa)
LysR family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ56_9BURK
LysR family transcriptional regulator {ECO:0000313|EMBL:EIK89246.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_1413_curated_27
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23117..24811)
DNA (1695bp) protein (565aa)
FadD3 protein {ECO:0000313|EMBL:EIK89245.1}; EC=6.2.1.3 {ECO:0000313|EMBL:EIK89245.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
fadD3; AMP-binding protein (EC:2.3.1.86); K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
FadD3 protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ55_9BURK
scnpilot_p_inoc_scaffold_1413_curated_28
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25001..25540)
DNA (540bp) protein (180aa)
3-methyladenine DNA glycosylase {ECO:0000313|EMBL:EIK89244.1}; EC=3.2.2.20 {ECO:0000313|EMBL:EIK89244.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
DNA-3-methyladenine glycosylase (EC:3.2.2.20)
3-methyladenine DNA glycosylase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJ54_9BURK
Displaying 28 items

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