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scnpilot_p_inoc_scaffold_1149_curated_15

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 15110..16309

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MK90_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 97.2
  • Coverage: 399.0
  • Bit_score: 760
  • Evalue 6.40e-217
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EIK89630.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 399.0
  • Bit_score: 760
  • Evalue 9.00e-217
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 75.7
  • Coverage: 395.0
  • Bit_score: 596
  • Evalue 6.60e-168

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1200
ATGCAAGTGAACATGAAACTGGCAGTGCTTGCCGCCGCCGTCGCGCTCGCCGCCTGTGGCAAGAAGGAAGAGGCTGCTCCCGCTCCCGCCGCGGCGCCCGCTGCGGCACCCGCTCCGGCCGCACCGCAGGAGGTCGTGGTCAAGATCGGTCACGTCGGCCCCACCAGCGGCGCGATCGCTCACCTGGGTAAGGACAACGAGAACGGCGCCCGCATGGCGATCGAGGAACTGAACGCCGCCGGCCTCACCATCGGTGGCGCCAAGGCCAAGTTCGAGCTGCTGGCCGAAGACGACGCCGCCGATCCCAAGCAGGGCACGGCCGCCGCGCAGAAGCTGGTCGACGCCAAGGTCAACGGCGTCATCGGCCACCTGAACTCCGGCACCACCATCCCCGCCTCGCAGCTCTACAACGACGCGGGCATCCCCCAGATTTCGCCCTCGGCGACCAACCCCAAGTACACCCGTCAGGGCTTCCCGGGCGCGTTCCGCGTGGTGGCCGACGACGTGCACCTGGGCGGCACGCTCGGCAAGTACGCCATCGAAACCCTCAAGGCCAAGAACGTGGCCGTGATCGACGACCGCACGGCCTATGGCCAAGGCGTGGCCGACGAGTTCGAGAAGGGCGTGAAGGCCGCTGGCGGCACCGTGGTGGGCCGCGAGTTCACCAACGACAAGGCGACCGACTTCAACGCCATCCTGACCACCCTGAAGGCCAAGAAGCCGGACGTGGTGTTCTTCGGCGGCATGGACGCCGTGGCCGGCCCCATGCTCAAGCAGATGAAGCAGCTCGGCATCAAGGCCAAGTTCATGGGCGGCGACGGCATCTGCACCTCCGAGCTGCCCAAGCTGGCCGGCGACGGCATCAGCGACGAGCAGGTCTACTGCGCCGAGGCCGGTGGTGTCGAGGGCGAGCAGAAGGCCGGCATGGACAAGTTCCGCGCCGACTTCAAGACCAAGTTCAACGCCGACGTGCAGGTGTACGCCCCGTACGTGTACGACGCCGTCAAGGTCATGGCCAACGCCATGGTCACCGCCGGCTCGGCCGACCCGAAGGTCTACCTGCCCGCGCTCAAGGCCACGAACTACAACGGCGTGACCGGCAAGATCGAGTTCGACGAGAAGGGCGACATCAAGAACGGTGCCCTGACGCTCATGACCTACAAGGGCGGCAACCGCACCACCATCGCCGTGATCCGCTGA
PROTEIN sequence
Length: 400
MQVNMKLAVLAAAVALAACGKKEEAAPAPAAAPAAAPAPAAPQEVVVKIGHVGPTSGAIAHLGKDNENGARMAIEELNAAGLTIGGAKAKFELLAEDDAADPKQGTAAAQKLVDAKVNGVIGHLNSGTTIPASQLYNDAGIPQISPSATNPKYTRQGFPGAFRVVADDVHLGGTLGKYAIETLKAKNVAVIDDRTAYGQGVADEFEKGVKAAGGTVVGREFTNDKATDFNAILTTLKAKKPDVVFFGGMDAVAGPMLKQMKQLGIKAKFMGGDGICTSELPKLAGDGISDEQVYCAEAGGVEGEQKAGMDKFRADFKTKFNADVQVYAPYVYDAVKVMANAMVTAGSADPKVYLPALKATNYNGVTGKIEFDEKGDIKNGALTLMTYKGGNRTTIAVIR*