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scnpilot_p_inoc_scaffold_1149_curated

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1149_curated_1
unknown

Not on your lists

comp(1..78)
DNA (78bp) protein (26aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1149_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(134..409)
DNA (276bp) protein (92aa)
Probable Fe(2+)-trafficking protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKA3_9BURK
Probable Fe(2+)-trafficking protein {ECO:0000256|HAMAP-Rule:MF_00686, ECO:0000256|SAAS:SAAS00073862}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1149_curated_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

652..1422
DNA (771bp) protein (257aa)
Ferredoxin--NADP(+) reductase {ECO:0000313|EMBL:EIK89642.1}; EC=1.18.1.2 {ECO:0000313|EMBL:EIK89642.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
oxidoreductase fad/NAD(P)-binding domain-containing protein; K00528 ferredoxin--NADP+ reductase [EC:1.18.1.2]
Ferredoxin--NADP(+) reductase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKA2_9BURK
scnpilot_p_inoc_scaffold_1149_curated_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1430..1945
DNA (516bp) protein (172aa)
Disulfide bond formation protein B n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKA1_9BURK
Disulfide bond formation protein B {ECO:0000256|HAMAP-Rule:MF_00286}; Disulfide oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00286}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
dsbB; disulfide oxidoreductase, membrane protein; K03611 disulfide bond formation protein DsbB
scnpilot_p_inoc_scaffold_1149_curated_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1953..3293)
DNA (1341bp) protein (447aa)
Amino-acid acetyltransferase {ECO:0000256|HAMAP-Rule:MF_01105}; EC=2.3.1.1 {ECO:0000256|HAMAP-Rule:MF_01105};; N-acetylglutamate synthase {ECO:0000256|HAMAP-Rule:MF_01105}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
argA; amino-acid acetyltransferase ArgA (EC:2.3.1.1)
Amino-acid acetyltransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKA0_9BURK
scnpilot_p_inoc_scaffold_1149_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3370..7260
DNA (3891bp) protein (1297aa)
ATP-dependent helicase HrpA; K03578 ATP-dependent helicase HrpA [EC:3.6.4.13]
ATP-dependent helicase HrpA n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MK99_9BURK
ATP-dependent helicase HrpA {ECO:0000313|EMBL:EIK89639.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_1149_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7369..8085
DNA (717bp) protein (239aa)
Rieske-I iron sulfur protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MK98_9BURK
Rieske-I iron sulfur protein {ECO:0000313|EMBL:EIK89638.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Rieske-I iron sulfur protein
scnpilot_p_inoc_scaffold_1149_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8158..9336)
DNA (1179bp) protein (393aa)
Methionine aminotransferase {ECO:0000313|EMBL:EIK89637.1}; EC=4.4.1.14 {ECO:0000313|EMBL:EIK89637.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
putative aminotransferase (EC:2.6.1.-); K14287 methionine aminotransferase [EC:2.6.1.-]
Methionine aminotransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MK97_9BURK
scnpilot_p_inoc_scaffold_1149_curated_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9449..10393)
DNA (945bp) protein (315aa)
Transcriptional regulator CysB-like protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MK96_9BURK
Transcriptional regulator CysB-like protein {ECO:0000313|EMBL:EIK89636.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
transcriptional regulator CysB-like protein; K13634 LysR family transcriptional regulator, cys regulon transcriptional activator
scnpilot_p_inoc_scaffold_1149_curated_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10390..10755)
DNA (366bp) protein (122aa)
hypothetical protein; K03795 sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
Cobalamin (Vitamin B12) biosynthesis CbiX protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MK95_9BURK
Cobalamin (Vitamin B12) biosynthesis CbiX protein {ECO:0000313|EMBL:EIK89635.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_1149_curated_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10758..11876)
DNA (1119bp) protein (373aa)
Permease YjgP/YjgQ n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MK94_9BURK
Permease YjgP/YjgQ {ECO:0000313|EMBL:EIK89634.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
permease YjgP/YjgQ; K11720 lipopolysaccharide export system permease protein
scnpilot_p_inoc_scaffold_1149_curated_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11873..12979)
DNA (1107bp) protein (369aa)
Permease n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MK93_9BURK
Permease {ECO:0000313|EMBL:EIK89633.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
permease; K07091 lipopolysaccharide export system permease protein
scnpilot_p_inoc_scaffold_1149_curated_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13007..14500
DNA (1494bp) protein (498aa)
PepA aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1]
Probable cytosol aminopeptidase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MK92_9BURK
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_1149_curated_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14515..14946
DNA (432bp) protein (144aa)
DNA polymerase III subunit chi; K02339 DNA polymerase III subunit chi [EC:2.7.7.7]
DNA polymerase III subunit chi n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MK91_9BURK
DNA polymerase III subunit chi {ECO:0000313|EMBL:EIK89631.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_1149_curated_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15110..16309
DNA (1200bp) protein (400aa)
Extracellular ligand-binding receptor n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MK90_9BURK
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EIK89630.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
scnpilot_p_inoc_scaffold_1149_curated_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16376..16930)
DNA (555bp) protein (185aa)
glutathione peroxydase (EC:1.11.1.9); K00432 glutathione peroxidase [EC:1.11.1.9]
Glutathione peroxidase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MK89_9BURK
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_1149_curated_17
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17006..17920)
DNA (915bp) protein (305aa)
Auxin efflux carrier n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MK88_9BURK
Auxin efflux carrier {ECO:0000313|EMBL:EIK89628.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
auxin efflux carrier
scnpilot_p_inoc_scaffold_1149_curated_18
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17950..18360)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MK87_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89627.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1149_curated_19
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18374..20428)
DNA (2055bp) protein (685aa)
TRAP transporter, 4TM/12TM fusion protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MK86_9BURK
TRAP transporter, 4TM/12TM fusion protein {ECO:0000313|EMBL:EIK89626.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
transporter
scnpilot_p_inoc_scaffold_1149_curated_20
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20501..21460)
DNA (960bp) protein (320aa)
TRAP transporter solute receptor, TAXI family n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MK85_9BURK
TRAP transporter solute receptor, TAXI family {ECO:0000313|EMBL:EIK89625.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
TRAP transporter solute receptor TAXI family protein; K07080
scnpilot_p_inoc_scaffold_1149_curated_21
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21678..22655
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MK84_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89624.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
putative Bug-like extracytoplasmic solute binding receptor, TTT family
scnpilot_p_inoc_scaffold_1149_curated_22
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22664..23581
DNA (918bp) protein (306aa)
Tyrosine recombinase XerD n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MK83_9BURK
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
xerD; site-specific recombinase; K04763 integrase/recombinase XerD
scnpilot_p_inoc_scaffold_1149_curated_23
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23588..24166)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MK82_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89622.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1149_curated_24
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24198..25682)
DNA (1485bp) protein (495aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.3.-) id=5079972 bin=GWF1_Burkholderiales_GWF1_66_17 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
PAS/PAC sensor hybrid histidine kinase (EC:2.7.3.-)
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
scnpilot_p_inoc_scaffold_1149_curated_25
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25679..26290)
DNA (612bp) protein (204aa)
Signal transduction histidine kinase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MK80_9BURK
Signal transduction histidine kinase {ECO:0000313|EMBL:EIK89620.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
signal transduction histidine kinase
Displaying 25 items

View Taxonomy