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SCNpilot_cont_1000_p_scaffold_108_curated

Search features with annotation key words

Displaying items 1-30 of 201 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_108_curated_1
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2..340)
DNA (339bp) protein (113aa)
Membrane protease subunit, stomatin/prohibitin n=1 Tax=Caulobacter sp. AP07 RepID=J2Q3G0_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:GAL87371.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_108_curated_2
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(563..823)
DNA (261bp) protein (87aa)
Band 7 protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IES1_BEII9
hypothetical protein
Band 7 protein {ECO:0000313|EMBL:ACB97011.1}; Flags: Precursor;; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCNpilot_cont_1000_p_scaffold_108_curated_3
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

920..2134
DNA (1215bp) protein (405aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EP69_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EHL30904.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
SCNpilot_cont_1000_p_scaffold_108_curated_4
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2109..2996)
DNA (888bp) protein (296aa)
Ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EPT4_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EHL30718.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
SCNpilot_cont_1000_p_scaffold_108_curated_5
R_Gammaproteobacteria_42_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2993..4504)
DNA (1512bp) protein (504aa)
putative thymidine phosphorylase (TdRPase) (EC:2.4.2.4)
Putative thymidine phosphorylase n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EQL4_9GAMM
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_42_13_curated
SCNpilot_cont_1000_p_scaffold_108_curated_6
R_Gammaproteobacteria_42_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4501..5859)
DNA (1359bp) protein (453aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EPT2_9GAMM
Metallo-beta-lactamase family protein, RNA-specific
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_42_13_curated
SCNpilot_cont_1000_p_scaffold_108_curated_7
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5958..6203)
DNA (246bp) protein (82aa)
Uncharacterized protein n=2 Tax=Legionella longbeachae RepID=D3HM04_LEGLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBJ13488.1}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_cont_1000_p_scaffold_108_curated_8
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6386..8761
DNA (2376bp) protein (792aa)
plasma-membrane proton-efflux P-type ATPase (EC:3.6.3.6); K01535 H+-transporting ATPase [EC:3.6.3.6]
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EP68_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EHL30903.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
SCNpilot_cont_1000_p_scaffold_108_curated_9
RHI_Legionellales_37_14, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8790..9191
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=1 Tax=Francisella philomiragia subsp. philomiragia ATCC 25015 RepID=C6YUN0_9GAMM
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Legionellales_37_14_curated
SCNpilot_cont_1000_p_scaffold_108_curated_10
unknown

Not on your lists

9295..9477
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_108_curated_11
GWE2_Gammaproteobacteria_37_16_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9583..11955
DNA (2373bp) protein (791aa)
phosphoketolase (EC:4.1.2.9); K01621 phosphoketolase [EC:4.1.2.9]
Probable phosphoketolase id=1774525 bin=GWE2_Gammaproteobacteria_37_16 species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWE2_Gammaproteobacteria_37_16 organism_group=Gammaproteobacteria organism_desc=Looks good, but small
Tax=GWE2_Gammaproteobacteria_37_16_curated
SCNpilot_cont_1000_p_scaffold_108_curated_12
Legionella pneumophila, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13175..13381
DNA (207bp) protein (69aa)
Antirestriction protein n=1 Tax=Legionella pneumophila (strain Corby) RepID=A5IFT4_LEGPC
antirestriction protein
Antirestriction protein {ECO:0000313|EMBL:CCD06784.1}; TaxID=91891 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella pneumophila subsp. pneumophila.;"
SCNpilot_cont_1000_p_scaffold_108_curated_13
Legionella pneumophila, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13473..15638
DNA (2166bp) protein (722aa)
katB; catalase-peroxidase KatB; K03782 catalase-peroxidase [EC:1.11.1.21] rbh
Catalase-peroxidase 1 {ECO:0000255|HAMAP-Rule:MF_01961}; Short=CP 1 {ECO:0000255|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000255|HAMAP-Rule:MF_01961};; Peroxidase/catalase 1 {ECO:0000255|HAMAP-Rule:MF_01961}; TaxID=297245 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella pneumophila (strain Lens).;"
catalase-peroxidase n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C8081
SCNpilot_cont_1000_p_scaffold_108_curated_14
Legionella oakridgensis, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15741..16178
DNA (438bp) protein (146aa)
Thioredoxin {ECO:0000313|EMBL:ETO93654.1}; EC=1.8.1.8 {ECO:0000313|EMBL:ETO93654.1};; TaxID=1274403 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella oakridgensis RV-2-2007.;"
thioredoxin; K03672 thioredoxin 2 [EC:1.8.1.8]
thioredoxin n=1 Tax=Legionella tunisiensis RepID=UPI0003753E95
SCNpilot_cont_1000_p_scaffold_108_curated_15
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16609..17868
DNA (1260bp) protein (420aa)
Na+/H+ antiporter n=2 Tax=Legionella longbeachae RepID=D1REC0_LEGLO
sodium/hydrogen exchanger; K03316 monovalent cation:H+ antiporter, CPA1 family
Putative sodium/hydrogen exchanger {ECO:0000313|EMBL:CBJ13650.1}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_cont_1000_p_scaffold_108_curated_16
Legionella drancourtii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17925..18407)
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EMM9_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EHL31423.1}; TaxID=658187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella drancourtii LLAP12.;"
transcriptional regulator, MarR family
SCNpilot_cont_1000_p_scaffold_108_curated_17
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18641..19861
DNA (1221bp) protein (407aa)
glutamate-cysteine ligase (EC:6.3.-.-); K06048 carboxylate-amine ligase [EC:6.3.-.-]
Putative glutamate--cysteine ligase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_01609};; Gamma-glutamylcysteine synthetase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
Carboxylate-amine ligase LLO_3209 n=2 Tax=Legionella longbeachae RepID=D3HMH6_LEGLN
SCNpilot_cont_1000_p_scaffold_108_curated_18
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19901..20593
DNA (693bp) protein (231aa)
Uncharacterized protein n=2 Tax=Legionella longbeachae RepID=D3HMH7_LEGLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBJ13666.1}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_cont_1000_p_scaffold_108_curated_19
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20608..22392
DNA (1785bp) protein (595aa)
asparagine synthase (EC:6.3.5.4); K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
Putative asparagine synthase, glutamine-hydrolyzing protein {ECO:0000313|EMBL:CBJ12256.1}; EC=6.3.5.4 {ECO:0000313|EMBL:CBJ12256.1};; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
Asparagine synthetase n=2 Tax=Legionella longbeachae RepID=D3HTL4_LEGLN
SCNpilot_cont_1000_p_scaffold_108_curated_20
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22433..22864
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Legionella longbeachae serogroup 1 (strain NSW150) RepID=D3HTL3_LEGLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBJ12255.1}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_cont_1000_p_scaffold_108_curated_21
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22960..24249)
DNA (1290bp) protein (430aa)
Putative voltage-gated chloride channel protein (ClC-type) n=1 Tax=Legionella longbeachae serogroup 1 (strain NSW150) RepID=D3HTM2_LEGLN
clcA; voltage-gated chloride channel protein (ClC-type); K03281 chloride channel protein, CIC family
Putative voltage-gated chloride channel protein (ClC-type) {ECO:0000313|EMBL:CBJ12264.1}; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
SCNpilot_cont_1000_p_scaffold_108_curated_22
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24322..25857)
DNA (1536bp) protein (512aa)
treF; alpha,alpha-trehalase (EC:3.2.1.28); K01194 alpha,alpha-trehalase [EC:3.2.1.28]
Alpha,alpha-trehalase {ECO:0000313|EMBL:CBJ13904.1}; EC=3.2.1.28 {ECO:0000313|EMBL:CBJ13904.1};; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
Periplasmic trehalase n=1 Tax=Legionella longbeachae D-4968 RepID=D1RD72_LEGLO
SCNpilot_cont_1000_p_scaffold_108_curated_23
unknown

Not on your lists

comp(25912..26007)
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_108_curated_24
Nitrosomonas communis, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26117..26377)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00031B6F57
Membrane protein {ECO:0000313|EMBL:AKH38661.1}; TaxID=44574 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas communis.;"
membrane protein
SCNpilot_cont_1000_p_scaffold_108_curated_25
Nitrosomonas communis, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26374..26634)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI000374B3C1
Membrane protein {ECO:0000313|EMBL:AKH38660.1}; TaxID=44574 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas communis.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_108_curated_26
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26637..27026)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y6B9_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG92805.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_cont_1000_p_scaffold_108_curated_27
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27344..28948)
DNA (1605bp) protein (535aa)
ferredoxin-dependent glutamate synthase (EC:1.4.7.1)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000346D10C
Glutamate synthase {ECO:0000313|EMBL:KGI78227.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
SCNpilot_cont_1000_p_scaffold_108_curated_28
Legionella oakridgensis, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28966..29820)
DNA (855bp) protein (285aa)
Glutamine amidotransferase n=6 Tax=Legionella pneumophila RepID=I7HYQ3_LEGPN
Putative glutamine amidotransferase {ECO:0000313|EMBL:AHE65930.1}; TaxID=1268635 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella oakridgensis ATCC 33761 = DSM 21215.;"
glutamine amidotransferase; K07008 glutamine amidotransferase
SCNpilot_cont_1000_p_scaffold_108_curated_29
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

Not on your lists

30174..32111
DNA (1938bp) protein (646aa)
Kef-type K+ transport system, membrane component id=2175662 bin=GWB2_Chloroflexi_54_36 species=Geitlerinema sp. PCC 7407 genus=Geitlerinema taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
transporter, CPA2 family
Tax=GWB2_Chloroflexi_54_36_curated
SCNpilot_cont_1000_p_scaffold_108_curated_30
Legionella massiliensis, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32338..32694
DNA (357bp) protein (119aa)
Uncharacterized protein n=2 Tax=Legionella longbeachae RepID=D3HJK3_LEGLN
Uncharacterized protein {ECO:0000313|EMBL:CDZ76821.1}; TaxID=1034943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella massiliensis.;"
hypothetical protein
Displaying items 1-30 of 201 in total

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