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scnpilot_cont_500_p_scaffold_2202_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_2202_curated_1
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2..934
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI000361C4B5
Uncharacterized protein {ECO:0000313|EMBL:ERK69561.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_2202_curated_2
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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931..2733
DNA (1803bp) protein (601aa)
Uncharacterized protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RUH5_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK72199.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
type IV secretory pathway, VirD4 component
scnpilot_cont_500_p_scaffold_2202_curated_3
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2733..3137
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RTT2_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK72191.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
scnpilot_cont_500_p_scaffold_2202_curated_4
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3134..3604
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI00036EFAC0
Uncharacterized protein {ECO:0000313|EMBL:ERK72192.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_2202_curated_5
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3717..4160
DNA (444bp) protein (148aa)
Single-stranded DNA-binding protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RTR8_LEIAQ
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ssb1; Single-stranded DNA-binding protein
scnpilot_cont_500_p_scaffold_2202_curated_6
Rhodococcus rhodochrous, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4421..6439
DNA (2019bp) protein (673aa)
Uncharacterized protein n=1 Tax=Streptococcus anginosus subsp. whileyi CCUG 39159 RepID=I0S798_STRAP
Uncharacterized protein {ECO:0000313|EMBL:ETT27862.1}; TaxID=1429046 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus rhodochrous ATCC 21198.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_2202_curated_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6994..9726)
DNA (2733bp) protein (911aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI0003681644
Uncharacterized protein {ECO:0000313|EMBL:ERK71283.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
trwC4; conjugative relaxase TrwC
scnpilot_cont_500_p_scaffold_2202_curated_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10040..10891)
DNA (852bp) protein (284aa)
Uncharacterized protein (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T5G1_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK72733.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_2202_curated_9
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11198..11530
DNA (333bp) protein (111aa)
Transcriptional regulator, ArsR family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RVD0_LEIAQ
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ERK72741.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_2202_curated_10
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11932..13032
DNA (1101bp) protein (367aa)
Putative transposase n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RPZ7_BLASD
putative transposase
Putative transposase {ECO:0000313|EMBL:CCG02766.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
scnpilot_cont_500_p_scaffold_2202_curated_11
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13069..13746)
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI0003798B81
Cobalt transporter {ECO:0000313|EMBL:KHK98971.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_2202_curated_12
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13743..14087)
DNA (345bp) protein (115aa)
ArsR family transcriptional regulator n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00035C54C0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAT88744.1}; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. xyli (strain CTCB07).;"
Displaying 12 items

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