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scnpilot_cont_500_p_scaffold_278_curated_27

Organism: scnpilot_dereplicated_Leifsonia_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 13357..14352

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 331.0
  • Bit_score: 639
  • Evalue 1.90e-180
DNA-directed RNA polymerase subunit alpha n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RT73_LEIAQ similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 331.0
  • Bit_score: 639
  • Evalue 1.40e-180
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 98.8
  • Coverage: 331.0
  • Bit_score: 634
  • Evalue 1.80e-179

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Taxonomy

Leifsonia aquatica → Leifsonia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 996
GTGCTCATTGCACAGCGTCCTACGCTCACCGAAGAGAACATCTCCGAGTTCCGCTCGCGGTTCGTCATCGAGCCCCTGGAGCCCGGCTTCGGATACACCCTCGGCAACTCGCTTCGTCGCACCCTGCTCTCGTCCATCCCCGGTGCCGCAGTCACCAGCATCCGCATCGACGGCGTGCTGCACGAGTTCAGCACCGTCCCGGGCGTGAAGGAAGACGTCACCGAGATCATCCTGAACATCAAGGGTCTCGTGGTGTCGAGCGAGCACGACGAGCCGATCACCGCCTACCTGCGCAAGACCGGCTCCGGCCAGGTCACCGCGGCGGACATCTCGGCTCCGGCGGGTGTGGAGATCCACAACCCCGAGCTGGTCATCGCGACCCTCAACGACAAGGCGAAGTTCGAGGTCGAGCTCACCATCGAGCGCGGCCGCGGCTACGTGTCGGCCCAGCAGAACCGCAACGAGTACAGCGAGGCGGGCCAGATCCCGATCGACTCGATCTACTCCCCGGTCCTGAAGGTCACCTACCGCGTCGAGGCCACCCGTGCCGGCGAGCGCACCGACTTCGACCGCCTCGTGGTCGACGTCGAGAGCAAGCCCGCGATCACCCCTCGTGACGCGATCGCGTCGGCCGGCCGCACGCTCGTCGAGCTGTTCGGTCTGGCGCGCGAGCTCAACAGCGCCGCCGAGGGCATCGAGATCGGCCCCGCGCCGGTCGACCAGGTCCTCAGCTCCGAGCTCTCGATGCCCATCGAGGACCTCGACCTGTCGGTCCGTTCGTACAACTGCCTCAAGCGCGAGGGCATCAACACCGTGAGCGAGCTCGTCTCGCTGTCGGAGACGCAGCTCATGAACATCCGCAACTTCGGTCAGAAGTCGGTGGATGAGGTCAAGGACAAGCTGACGGAGATGGGTCTGTCGCTGAAGGACTCGGTTCCCGGGTTCGACGGTGCCCACTTCTACAGCGGGTACGAAGAGGACGAGACCACCATCTGA
PROTEIN sequence
Length: 332
VLIAQRPTLTEENISEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVLHEFSTVPGVKEDVTEIILNIKGLVVSSEHDEPITAYLRKTGSGQVTAADISAPAGVEIHNPELVIATLNDKAKFEVELTIERGRGYVSAQQNRNEYSEAGQIPIDSIYSPVLKVTYRVEATRAGERTDFDRLVVDVESKPAITPRDAIASAGRTLVELFGLARELNSAAEGIEIGPAPVDQVLSSELSMPIEDLDLSVRSYNCLKREGINTVSELVSLSETQLMNIRNFGQKSVDEVKDKLTEMGLSLKDSVPGFDGAHFYSGYEEDETTI*