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scnpilot_cont_500_p_scaffold_278_curated

Search features with annotation key words

Displaying items 1-30 of 152 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_278_curated_1
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


2..181
DNA (180bp) protein (60aa)
50S ribosomal protein L3 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TBE2_LEIAQ
rplC; 50S ribosomal protein L3; K02906 large subunit ribosomal protein L3
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
scnpilot_cont_500_p_scaffold_278_curated_2
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


186..842
DNA (657bp) protein (219aa)
50S ribosomal protein L4 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RT98_LEIAQ
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 rbh
scnpilot_cont_500_p_scaffold_278_curated_3
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


842..1141
DNA (300bp) protein (100aa)
50S ribosomal protein L23 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R9T5_LEIAQ
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23
scnpilot_cont_500_p_scaffold_278_curated_4
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


1166..2005
DNA (840bp) protein (280aa)
50S ribosomal protein L2 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RTZ0_LEIAQ
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
50S ribosomal protein L2
scnpilot_cont_500_p_scaffold_278_curated_5
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


2018..2299
DNA (282bp) protein (94aa)
30S ribosomal protein S19 n=2 Tax=Leifsonia PF85_LEIXC">RepID=U3PF85_LEIXC
30S ribosomal protein S19
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
scnpilot_cont_500_p_scaffold_278_curated_6
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


2325..2717
DNA (393bp) protein (131aa)
50S ribosomal protein L22 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TBD7_LEIAQ
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22
scnpilot_cont_500_p_scaffold_278_curated_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


2717..3484
DNA (768bp) protein (256aa)
30S ribosomal protein S3 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RT93_LEIAQ
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
30S ribosomal protein S3
scnpilot_cont_500_p_scaffold_278_curated_8
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


3487..3906
DNA (420bp) protein (140aa)
50S ribosomal protein L16 n=2 Tax=Leifsonia RepID=U3P7M4_LEIXC
50S ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
scnpilot_cont_500_p_scaffold_278_curated_9
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


3906..4238
DNA (333bp) protein (111aa)
Ribosomal protein L29 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RTY4_LEIAQ
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
50S ribosomal protein L29
scnpilot_cont_500_p_scaffold_278_curated_10
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


4238..4546
DNA (309bp) protein (103aa)
30S ribosomal protein S17 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T3F5_LEIAQ
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
30S ribosomal protein S17
scnpilot_cont_500_p_scaffold_278_curated_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


4543..4911
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TBD2_LEIAQ
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14
scnpilot_cont_500_p_scaffold_278_curated_12
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


4915..5274
DNA (360bp) protein (120aa)
50S ribosomal protein L24 n=2 Tax=Leifsonia RepID=U3P8Z8_LEIXC
50S ribosomal protein L24
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
scnpilot_cont_500_p_scaffold_278_curated_13
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


5274..5861
DNA (588bp) protein (196aa)
50S ribosomal protein L5 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R9S9_LEIAQ
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
50S ribosomal protein L5
scnpilot_cont_500_p_scaffold_278_curated_14
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


5979..6377
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RTY2_LEIAQ
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8
scnpilot_cont_500_p_scaffold_278_curated_15
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


6384..6920
DNA (537bp) protein (179aa)
50S ribosomal protein L6 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T3F1_LEIAQ
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 rbh
scnpilot_cont_500_p_scaffold_278_curated_16
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


6923..7294
DNA (372bp) protein (124aa)
50S ribosomal protein L18 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TBC7_LEIAQ
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
50S ribosomal protein L18
scnpilot_cont_500_p_scaffold_278_curated_17
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


7291..7998
DNA (708bp) protein (236aa)
30S ribosomal protein S5 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RT83_LEIAQ
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
30S ribosomal protein S5
scnpilot_cont_500_p_scaffold_278_curated_18
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


7998..8183
DNA (186bp) protein (62aa)
50S ribosomal protein L30 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R9S5_LEIAQ
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30
scnpilot_cont_500_p_scaffold_278_curated_19
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


8183..8866
DNA (684bp) protein (228aa)
50S ribosomal protein L15 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RTX7_LEIAQ
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
50S ribosomal protein L15
scnpilot_cont_500_p_scaffold_278_curated_20
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


8943..10265
DNA (1323bp) protein (441aa)
Protein translocase subunit SecY n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T3E8_LEIAQ
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
preprotein translocase subunit SecY
scnpilot_cont_500_p_scaffold_278_curated_21
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10262..10873
DNA (612bp) protein (204aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aq
Adenylate kinase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TBC2_LEIAQ
adenylate kinase
scnpilot_cont_500_p_scaffold_278_curated_22
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10882..11712
DNA (831bp) protein (277aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Methionine aminopeptidase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RT78_LEIAQ
methionine aminopeptidase
scnpilot_cont_500_p_scaffold_278_curated_23
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11873..12094
DNA (222bp) protein (74aa)
Translation initiation factor IF-1 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R9S1_LEIAQ
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1
scnpilot_cont_500_p_scaffold_278_curated_24
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12173..12286
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RTX2_LEIAQ
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
rpmJ; 50S ribosomal protein L36; K02919 large subunit ribosomal protein L36
scnpilot_cont_500_p_scaffold_278_curated_25
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


12425..12799
DNA (375bp) protein (125aa)
30S ribosomal protein S13 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T3E3_LEIAQ
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13
scnpilot_cont_500_p_scaffold_278_curated_26
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


12838..13236
DNA (399bp) protein (133aa)
30S ribosomal protein S11 n=1 Tax=Microbacteriaceae RepID=UPI00035C6A76
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
scnpilot_cont_500_p_scaffold_278_curated_27
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13357..14352
DNA (996bp) protein (332aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
DNA-directed RNA polymerase subunit alpha n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RT73_LEIAQ
DNA-directed RNA polymerase subunit alpha
scnpilot_cont_500_p_scaffold_278_curated_28
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


14408..14959
DNA (552bp) protein (184aa)
50S ribosomal protein L17 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R9R7_LEIAQ
50S ribosomal protein L17 {ECO:0000256|RuleBase:RU000661}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17
scnpilot_cont_500_p_scaffold_278_curated_29
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15034..16077
DNA (1044bp) protein (348aa)
Acetyltransferase, GNAT family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RTW7_LEIAQ
Acetyltransferase, GNAT family {ECO:0000313|EMBL:ERK71974.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
putative acetyltransferase, GNAT
scnpilot_cont_500_p_scaffold_278_curated_30
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16071..18032)
DNA (1962bp) protein (654aa)
Acyltransferase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T3D9_LEIAQ
Acyltransferase {ECO:0000313|EMBL:ERK71973.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
yrhL; lipopolysaccharide modification acyltransferase rbh
Displaying items 1-30 of 152 in total

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