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SCNpilot_expt_1000_bf_scaffold_1357_curated

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Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1357_curated_1
Mesorhizobium sp. L103C120A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73..441
DNA (369bp) protein (123aa)
Rhodanese n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HDF6_9RHIZ
Rhodanese {ECO:0000313|EMBL:ESZ56243.1}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C120A0.;"
Rhodanese-related sulfurtransferase
SCNpilot_expt_1000_bf_scaffold_1357_curated_2
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(454..1362)
DNA (909bp) protein (303aa)
UPI0003CFEE27 related cluster n=1 Tax=unknown RepID=UPI0003CFEE27
Hydrolase {ECO:0000313|EMBL:ESZ12484.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
alpha/beta hydrolase fold protein
SCNpilot_expt_1000_bf_scaffold_1357_curated_3
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1411..1863
DNA (453bp) protein (151aa)
Regulatory protein MarR n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T8Y2_MESCW
MarR family transcriptional regulator
Regulatory protein MarR {ECO:0000313|EMBL:ADV13030.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_1357_curated_4
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1935..2288)
DNA (354bp) protein (118aa)
UPI0003D0004F related cluster n=1 Tax=unknown RepID=UPI0003D0004F
Uncharacterized protein {ECO:0000313|EMBL:CDX57423.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1357_curated_5
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2493..3497
DNA (1005bp) protein (335aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_01225}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
UPI0003CEABC8 related cluster n=1 Tax=unknown RepID=UPI0003CEABC8
molybdenum cofactor biosynthesis protein A; K03639 molybdenum cofactor biosynthesis protein
SCNpilot_expt_1000_bf_scaffold_1357_curated_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3556..4026
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YBR3_MESOW
Uncharacterized protein {ECO:0000313|EMBL:CDX57421.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1357_curated_7
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4163..5083
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YBR1_MESOW
Uncharacterized protein {ECO:0000313|EMBL:CDX17890.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1357_curated_8
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5118..5639
DNA (522bp) protein (174aa)
Molybdopterin-guanine dinucleotide biosynthesis protein MobB n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FRW3_9RHIZ
Molybdopterin-guanine dinucleotide biosynthesis protein B {ECO:0000313|EMBL:CDX57417.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
molybdopterin-guanine dinucleotide biosynthesis protein B; K03753 molybdopterin-guanine dinucleotide biosynthesis protein B
SCNpilot_expt_1000_bf_scaffold_1357_curated_9
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5832..6614
DNA (783bp) protein (261aa)
Family 3 extracellular solute-binding protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YHJ3_9RHIZ
Family 3 extracellular solute-binding protein {ECO:0000313|EMBL:EHH07781.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
family 3 extracellular solute-binding protein
SCNpilot_expt_1000_bf_scaffold_1357_curated_10
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6747..7460
DNA (714bp) protein (238aa)
UPI0003D0361B related cluster n=1 Tax=unknown RepID=UPI0003D0361B
ABC transporter permease {ECO:0000313|EMBL:EZQ15117.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
polar amino acid ABC transporter permease; K02029 polar amino acid transport system permease protein
SCNpilot_expt_1000_bf_scaffold_1357_curated_11
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7457..8287
DNA (831bp) protein (277aa)
UPI0003CE070C related cluster n=1 Tax=unknown RepID=UPI0003CE070C
Amino acid ABC transporter permease {ECO:0000313|EMBL:ESW91284.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
ABC transporter permease; K02029 polar amino acid transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_1357_curated_12
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8393..9262
DNA (870bp) protein (290aa)
Oxidoreductase n=1 Tax=Mesorhizobium sp. LSHC420B00 PF1_9RHIZ">RepID=V7FPF1_9RHIZ
Oxidoreductase {ECO:0000313|EMBL:ESX82301.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
6-phosphogluconate dehydrogenase NAD-binding protein
SCNpilot_expt_1000_bf_scaffold_1357_curated_13
Mesorhizobium sp. LSHC422A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9303..10328)
DNA (1026bp) protein (342aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1287294 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC422A00.;"
TIM-barrel protein, yjbN family; K05539 tRNA-dihydrouridine synthase A [EC:1.-.-.-]
UPI0003CF7A5B related cluster n=1 Tax=unknown RepID=UPI0003CF7A5B
SCNpilot_expt_1000_bf_scaffold_1357_curated_14
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10669..11916
DNA (1248bp) protein (416aa)
Group 1 glycosyl transferase n=1 Tax=Cupriavidus basilensis OR16 RepID=H1SBG0_9BURK
Group 1 glycosyl transferase {ECO:0000313|EMBL:EHP40128.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
SCNpilot_expt_1000_bf_scaffold_1357_curated_15
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12109..12867
DNA (759bp) protein (253aa)
UPI0003CF5042 related cluster n=1 Tax=unknown RepID=UPI0003CF5042
Copper homeostasis protein CutC {ECO:0000256|HAMAP-Rule:MF_00795}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
copper homeostasis protein; K06201 copper homeostasis protein rbh
SCNpilot_expt_1000_bf_scaffold_1357_curated_16
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12864..13361
DNA (498bp) protein (166aa)
GNAT family acetyltransferase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FJ13_9RHIZ
GCN5-like N-acetyltransferase {ECO:0000313|EMBL:CDX29164.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein; K06977
SCNpilot_expt_1000_bf_scaffold_1357_curated_17
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13769..14089)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Ahrensia kielensis RepID=UPI0003800589
Multidrug transporter {ECO:0000313|EMBL:KFL28014.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
small multidrug resistance protein; K11741 quaternary ammonium compound-resistance protein SugE
SCNpilot_expt_1000_bf_scaffold_1357_curated_18
unknown

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comp(14316..14438)
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1357_curated_19
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14458..15840)
DNA (1383bp) protein (461aa)
Major facilitator superfamily MFS_1 n=1 Tax=Afipia sp. 1NLS2 RepID=D6VB24_9BRAD
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EFI49950.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
MFS transporter
SCNpilot_expt_1000_bf_scaffold_1357_curated_20
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16067..16861)
DNA (795bp) protein (265aa)
carbon monoxide dehydrogenase subunit C; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2] rbh
Carbon monoxide dehydrogenase chain C n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98L92_RHILO
Carbon monoxide dehydrogenase chain C {ECO:0000313|EMBL:BAB48571.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_1000_bf_scaffold_1357_curated_21
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16874..19222)
DNA (2349bp) protein (783aa)
UPI0003CF6C5B related cluster n=1 Tax=unknown RepID=UPI0003CF6C5B
Carbon-monoxide dehydrogenase {ECO:0000313|EMBL:ESY74713.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
SCNpilot_expt_1000_bf_scaffold_1357_curated_22
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19337..19837)
DNA (501bp) protein (167aa)
Putative carbon-monoxide dehydrogenase small subunit, coxS-like protein {ECO:0000313|EMBL:CDX58914.1}; EC=1.2.99.2 {ECO:0000313|EMBL:CDX58914.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
carbon-monoxide dehydrogenase small subunit; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2]
UPI0003CF6602 related cluster n=1 Tax=unknown RepID=UPI0003CF6602
SCNpilot_expt_1000_bf_scaffold_1357_curated_23
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20029..20877)
DNA (849bp) protein (283aa)
UPI0003D00A77 related cluster n=1 Tax=unknown RepID=UPI0003D00A77
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
sec-independent protein translocase component; K03118 sec-independent protein translocase protein TatC rbh
SCNpilot_expt_1000_bf_scaffold_1357_curated_24
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20874..21611)
DNA (738bp) protein (246aa)
UPI0003CFF063 related cluster n=1 Tax=unknown RepID=UPI0003CFF063
Sec-independent protein translocase protein TatB {ECO:0000256|HAMAP-Rule:MF_00237, ECO:0000256|SAAS:SAAS00028234}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
twin-arginine translocation protein, TatB subunit; K03117 sec-independent protein translocase protein TatB
SCNpilot_expt_1000_bf_scaffold_1357_curated_25
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21644..21865)
DNA (222bp) protein (74aa)
Sec-independent protein translocase protein TatA n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YD28_9RHIZ
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
twin arginine-targeting protein translocase, TatA/E family
SCNpilot_expt_1000_bf_scaffold_1357_curated_26
Mesorhizobium sp. LSHC412B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22033..22776)
DNA (744bp) protein (248aa)
UPI0003CEAE84 related cluster n=1 Tax=unknown RepID=UPI0003CEAE84
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=1287285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC412B00.;"
hypothetical protein; K06024 segregation and condensation protein B rbh
SCNpilot_expt_1000_bf_scaffold_1357_curated_27
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22776..23615)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EU39_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV07413.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein; K05896 segregation and condensation protein A rbh
SCNpilot_expt_1000_bf_scaffold_1357_curated_28
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23643..24662)
DNA (1020bp) protein (340aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
glycoside hydrolase family 3 domain-containing protein; K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52]
beta-hexosaminidase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036457F4
SCNpilot_expt_1000_bf_scaffold_1357_curated_29
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24782..27790)
DNA (3009bp) protein (1003aa)
Sporulation domain-containing protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YD23_9RHIZ
Sporulation domain-containing protein {ECO:0000313|EMBL:EHH10495.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1357_curated_30
unknown

Not on your lists

28257..29042
DNA (786bp) protein (262aa)

This feature has no annotations

Displaying items 1-30 of 37 in total

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