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SCNpilot_expt_1000_bf_scaffold_2829_curated_14

Organism: scnpilot_dereplicated_Mesorhizobium_2

near complete RP 45 / 55 MC: 1 BSCG 45 / 51 ASCG 11 / 38 MC: 2
Location: 12817..13959

Top 3 Functional Annotations

Value Algorithm Source
amino acid ABC transporter permease n=1 Tax=Hoeflea sp. 108 RepID=UPI000374FB9D similarity UNIREF
DB: UNIREF100
  • Identity: 72.4
  • Coverage: 380.0
  • Bit_score: 565
  • Evalue 4.90e-158
Amino acid ABC transporter permease {ECO:0000313|EMBL:EZQ15127.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.1
  • Coverage: 380.0
  • Bit_score: 657
  • Evalue 1.00e-185
polar amino acid ABC transporter inner membrane subunit; K09970 general L-amino acid transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 380.0
  • Bit_score: 555
  • Evalue 1.20e-155

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Taxonomy

Pseudomonas bauzanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1143
TTGATCTATGACCCGAGGGTCCGGGGCATAGTCTTCCAGATAATTCTGGTCGCGCTGCTAGCAGCAGGCATTTGGTGGATCGTAGACAATACGATCGAAAATCTGCGTCGCTCCAACATTACAACCGGCTTTGCGTTCCTGCGAGGAAGGGCGGGTTTTGACATTTCCGATCGGTTGATCGAGTACAGTTCAGACTCGTCCTACGGTCGCGCGCTCATTGTCGGTGTGCTCAATACCGCTGCCGTCGCGGCGGCTGGCATCGTAACGGCTACGATCCTTGGGTTCCTTGTTGGCGTTGGGCGGTTGTCGAACAATTGGCTGATCCGCAAGCTGGCGACGGCTTACGTAGAGCTTTTCCGCAATATTCCGCCGCTGCTGGTGATCTTGTTCTGGTACCAAGGAGTATTGGCGCTTCTACCCAGCGTACGCGACAGCGTTTCTCTCCCACTTGGATCGTATCTCAACAATCGCGGCTTTTATCTTCCGCGCTTTGTTTGGGAGCCGGGTTCGTGGCTGATCTTCGCCGGTTTTGTGGTGGGTCTTGCGCTGAGTTGGTATCTGGCTCGGCGTGCGAGAATGCGTCAGATGGCGACCGGCCAGCAGTTTCCGGTGCTTCTCACCAGCATTGCACTCGTAGTGGGTCTACCCTTGTTGGGTTTCTTGGCGGCCGGAATGCCGGTCTCCGTGGATTTCCCGCAAAAGGGTACGTTTAACCTGACCGGCGGAATGAACGTCAAACCAGAGTTCTTGTCGCTCTACCTAGCGCTGTCATTCTATACAGCGGCGTTTATCGCCGAGATCGTGCGTGCCGGCATCATGGGTGTTCCGCGCGGCCAGACGGAAGCTTACTCGGCGTTGGGCCTGCGTTCGAACCTAGGCCTAAGGCTGGTGGTTATTCCGCAGGCAATGCGGATCATTATCCCGCCACTCACAAGCCAGTATCTCAACCTGACCAAGAATTCGTCTCTGGCCGTGGCGATTGGCTACCCGGATTTGTACGCGATCGGTGGGACGATCCTCAATCAAACAGGACAAGCGATTGAGGTCGTTGTCATCTTCATGGTGGTCTACCTGAGCATCAGTATCCTCACCTCCCTTCTCATGAACTGGTTCAACACCAAAATGGCGTTGAAGGAGAGGTGA
PROTEIN sequence
Length: 381
LIYDPRVRGIVFQIILVALLAAGIWWIVDNTIENLRRSNITTGFAFLRGRAGFDISDRLIEYSSDSSYGRALIVGVLNTAAVAAAGIVTATILGFLVGVGRLSNNWLIRKLATAYVELFRNIPPLLVILFWYQGVLALLPSVRDSVSLPLGSYLNNRGFYLPRFVWEPGSWLIFAGFVVGLALSWYLARRARMRQMATGQQFPVLLTSIALVVGLPLLGFLAAGMPVSVDFPQKGTFNLTGGMNVKPEFLSLYLALSFYTAAFIAEIVRAGIMGVPRGQTEAYSALGLRSNLGLRLVVIPQAMRIIIPPLTSQYLNLTKNSSLAVAIGYPDLYAIGGTILNQTGQAIEVVVIFMVVYLSISILTSLLMNWFNTKMALKER*