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SCNpilot_expt_1000_bf_scaffold_1553_curated_25

Organism: scnpilot_dereplicated_Mesorhizobium_2

near complete RP 45 / 55 MC: 1 BSCG 45 / 51 ASCG 11 / 38 MC: 2
Location: comp(26320..27555)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D005AF related cluster n=1 Tax=unknown RepID=UPI0003D005AF similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 422.0
  • Bit_score: 550
  • Evalue 1.80e-153
Hemolysin D {ECO:0000313|EMBL:ESZ21944.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.0
  • Coverage: 422.0
  • Bit_score: 550
  • Evalue 2.50e-153
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 64.1
  • Coverage: 443.0
  • Bit_score: 527
  • Evalue 3.90e-147

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Taxonomy

Mesorhizobium sp. L48C026A00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1236
GTGATCAAGCGCTTCATCATCGCTTTCGTACTGCTCGTGCTGATTGGCGGCGCCATCGTCGGGTTCAACCTGTTCCGCGAAAAGGCGATCAGCGACTTCTTCGCCACCATGAAGGCGCCTGCCGCCACCATCTCGACGACGGTCGTCAAACCGCTCGACTGGACCCCGGGCATCGAGGCCATCGGCACCGTTGCGGCCGCGCGCGGCGTCGATCTGACGGTCGAGACGACCGGCATCGTCAAGGACGTGCTGTTTGCCGCCAACGAACATGTCGAGGAAGGCCAGTCGCTGGTTCGCCTCGACGATGCCGTGCAGCAGGCCGACCTCGCCGCGGCAAAGACGCAAGCCGCGCTGGACCGGCAGGCGCTCGACCGTGCGCTCGCCTTGCAGGAGCGCGGCGTCGGCACCGAGGCAACGCTTGATGCGGCCCGCGCCGCCTCGTCCGCCTCGGCTTCACAGGTTGCCAAGCTGCAGGCCGTGCTCGACCAGAAGCTTCTGAAGGCCCCGTTCTCCGGCACCATCGGCATTCCGAGGGTCGAGGAAGGCCAGTATGTCGCGCCGGGCAACGCGGTCGCCACCTTGCAGGACATCGACACCATGCGCGCCGACTTCACCGTGCCGGAGCAACGCTTCAGCGAGTTGAAGATCGGCCAGCCGGTCCATTTCGGCCTGGCTGCCGGGGATCTGCCTTACGAGGGCAAGGTCGTCGGCATCGACCCCAAGATCGATCCCGTAAGCCGCCTCGTTTCGGTTCGCGCCGAAATCACCAATCCCGACGGTCGCCTCAGCCCCGGCCAGTTCGTGCAGGTGCGCGTTGAACTGCCGGAGGAACAGAATGTTCTGGCGCTGCCCCAGACGGCGCTCACCACCAGCCTTTACGGCGACTTCATCTTCGTCGTGAAGCCGGCCCAGCCGAAGCAGGACGCCAAGCCGGCGGATGCCGCCGCTGCCCCCGCTGCCGCAGAGGGCGAAGCCAAGCCTGCTGCCGACGCTGCCAAGCCGGCGACCGATGCTGCCAAACCTGTGGAAGGCGCCAAGCCCGAACTCGTCCTGGCGCAGGTTTTCGTCACGCCGGGCCGTCGCAATGCGGGTCTGGTCGAAATCACCAAGGGCATTGCTGCCGGCGACGAGGTCGTGACTGCCGGGCAGAACCGCCTGTTCAACGGCATGTCCGTCAACGTCGACAACACCATCGACCCGACAAAGCCAGCTAACCCGCAGGCGGCCGCACAATGA
PROTEIN sequence
Length: 412
VIKRFIIAFVLLVLIGGAIVGFNLFREKAISDFFATMKAPAATISTTVVKPLDWTPGIEAIGTVAAARGVDLTVETTGIVKDVLFAANEHVEEGQSLVRLDDAVQQADLAAAKTQAALDRQALDRALALQERGVGTEATLDAARAASSASASQVAKLQAVLDQKLLKAPFSGTIGIPRVEEGQYVAPGNAVATLQDIDTMRADFTVPEQRFSELKIGQPVHFGLAAGDLPYEGKVVGIDPKIDPVSRLVSVRAEITNPDGRLSPGQFVQVRVELPEEQNVLALPQTALTTSLYGDFIFVVKPAQPKQDAKPADAAAAPAAAEGEAKPAADAAKPATDAAKPVEGAKPELVLAQVFVTPGRRNAGLVEITKGIAAGDEVVTAGQNRLFNGMSVNVDNTIDPTKPANPQAAAQ*