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SCNpilot_expt_1000_bf_scaffold_3765_curated_29

Organism: scnpilot_dereplicated_Mesorhizobium_2

near complete RP 45 / 55 MC: 1 BSCG 45 / 51 ASCG 11 / 38 MC: 2
Location: comp(27603..28529)

Top 3 Functional Annotations

Value Algorithm Source
Putative RarD protein, chloramphenicol transporter n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQM0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 76.5
  • Coverage: 302.0
  • Bit_score: 476
  • Evalue 1.90e-131
Putative RarD protein, chloramphenicol transporter {ECO:0000313|EMBL:EHK56935.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.5
  • Coverage: 302.0
  • Bit_score: 476
  • Evalue 2.60e-131
putative RarD protein, chloramphenicol transporter; K05786 chloramphenicol-sensitive protein RarD similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 297.0
  • Bit_score: 417
  • Evalue 3.20e-114

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Taxonomy

Mesorhizobium alhagi → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 927
ATGAATGACGAACCGACGACCCCAGATGACAAGGCCGCGCGACGGGGCTTTCTCTTTGCCCTAAGCGCCTACCTGATGTGGGGCTTTCTGCCCTTCTACATGAAGGCGGTCGCGCACATTCCGGCCATCGAGGTCGTGGCGCACCGGGTCATCTGGTCGTTGCCGATCGCCGGTGCGCTGCTGATCTGGCTTGGCCGCACGGACGACATCAAGCGCGCGGTGCGCACCCCTCGAACGCTGATGATGGGCGGGCTGACGGCTGCACTGATTACCGTGAACTGGTGCGTCTACGTCTGGGCGATCTCTGTCGAGAGGACTCTTGAGACGGCCTTGGGCTACTACATCAATCCGTTGTTCAGCGTGTTCCTGGGCGCGGTGGTACTTGGAGAAAAGCTAAGCCGCATCCAGATTGTCGCCATCGCGCTGGCGGTGGTGGCCGTTCTCGTCCTGACGTGGGAGAACGGCGGCTTGCCGTGGGTATCGATAGTGCTGGCGATGTCATGGGCCTTCTACGCCTTGTTCAAGAAGACGTTGCCCATCGGTCCTGCGCAGGGTTTCTTCCTCGAAGTGCTGATTCTCTCGGTTCCAGCACTGGGCTATGTCGGCTGGCTGCAGGCGACAGGCCAAGGTCACTTCGGCGACCAGAGCGCAACCGACTTGTGGCTGCTTGTCGCCGGCGGTCTCGTCACCGCGATACCGTTGATCCTCTATGCGAATGGCGCAAAGCTGCTCAGACTGTCGACCATCGGCATAATGCAGTACATTGCGCCGACAATCATCTTCATCGTCGCGATATTCGTGTTTCGCGAGCCATTTTCCTTCGAGCGGGCAATAGCCTTCGGGCTGATCTGGATCGCCCTAATCATCTACTCGTGGTCGATGCTCTTTCGTAAGGGAGCCTCTGACCCGATCACATCTTCTCAATAA
PROTEIN sequence
Length: 309
MNDEPTTPDDKAARRGFLFALSAYLMWGFLPFYMKAVAHIPAIEVVAHRVIWSLPIAGALLIWLGRTDDIKRAVRTPRTLMMGGLTAALITVNWCVYVWAISVERTLETALGYYINPLFSVFLGAVVLGEKLSRIQIVAIALAVVAVLVLTWENGGLPWVSIVLAMSWAFYALFKKTLPIGPAQGFFLEVLILSVPALGYVGWLQATGQGHFGDQSATDLWLLVAGGLVTAIPLILYANGAKLLRLSTIGIMQYIAPTIIFIVAIFVFREPFSFERAIAFGLIWIALIIYSWSMLFRKGASDPITSSQ*