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SCNpilot_expt_1000_bf_scaffold_1027_curated_20

Organism: scnpilot_dereplicated_Mesorhizobium_2

near complete RP 45 / 55 MC: 1 BSCG 45 / 51 ASCG 11 / 38 MC: 2
Location: 16984..17727

Top 3 Functional Annotations

Value Algorithm Source
short-chain dehydrogenase n=1 Tax=Nocardiopsis alkaliphila RepID=UPI000347C973 similarity UNIREF
DB: UNIREF100
  • Identity: 36.6
  • Coverage: 246.0
  • Bit_score: 129
  • Evalue 3.40e-27
Oxidoreductase {ECO:0000313|EMBL:AIX74059.1}; TaxID=1484157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. PSNIH2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.4
  • Coverage: 239.0
  • Bit_score: 128
  • Evalue 1.10e-26
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 36.5
  • Coverage: 233.0
  • Bit_score: 124
  • Evalue 5.90e-26

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Taxonomy

Pantoea sp. PSNIH2 → Pantoea → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 744
ATGAACGGTGGGAGGCGAGTGCTGGTGGCAGGTGGCACCTCCCAGCTCGGCGCGGCTATCGCAGGCCGACTGGTCGGGAAGGGTGACCACGTCACCCTGTTCGGACGCAATAGCCGGAACAGCTCGTTCGTAAACGAGATCGGTGCGACGGTCATTGAGGGGGATGCGGCGGTTGCGACCGACAGAGCTCGCCTGGTGGAACAATTGAATGTCCATCCGGGCGGTCTGCACGGCCTGGTCGTCGTGTTTAGTGCCGTCTACACGGCGCGTCTCAGCGAGACGACCGATGAAGCCTGGGACGCTGTATTGGAGGCAAATATACTTGCCCCCATACTCGTCGCGCAGGTCTGCCTTCCGCTCATCAACAATGGCGGCTCGATCGTCTTTATCGGATCGGGCACATCGCAGTGGCCGGAGATGGAGCTTGGCGCTTTTTCGGTTGCGAAGCGAATGCTGGAACGAATGGCGCAGGTGCTCGCCATGGAGGTGGCGCTTAGGGATATCCGCGTCAATGTCGTCAATCCCGGCGAGATAGACCTTGTTGTCGGCGAGGCCAGCTTGCCACCTCTACGAACACTTGCCCCGACAGCGGTTCCACCGCTGGGGCGTCAAACAGAACCGGAAGACGTCGCGGCTGCCGTCGAGTTTTTCCTGTCGGAAGGCGCTTCGTTCTGTACTGGTACGTCGCTGACGGTAGACGGCGGAACAAGGGCGGCGTTGCGGTCGCATAGAGTGCGCCAATGA
PROTEIN sequence
Length: 248
MNGGRRVLVAGGTSQLGAAIAGRLVGKGDHVTLFGRNSRNSSFVNEIGATVIEGDAAVATDRARLVEQLNVHPGGLHGLVVVFSAVYTARLSETTDEAWDAVLEANILAPILVAQVCLPLINNGGSIVFIGSGTSQWPEMELGAFSVAKRMLERMAQVLAMEVALRDIRVNVVNPGEIDLVVGEASLPPLRTLAPTAVPPLGRQTEPEDVAAAVEFFLSEGASFCTGTSLTVDGGTRAALRSHRVRQ*