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SCNpilot_cont_1000_bf_scaffold_874_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_874_curated_1

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3..221
DNA (219bp) protein (73aa)
panE; 2-dehydropantoate 2-reductase; K00077 2-dehydropantoate 2-reductase [EC:1.1.1.169]
2-dehydropantoate 2-reductase n=1 Tax=uncultured marine bacterium HF10_25F10 RepID=A4GIK6_9BACT
2-dehydropantoate 2-reductase {ECO:0000313|EMBL:ABL61016.1}; TaxID=413068 species="Bacteria; environmental samples.;" source="uncultured marine bacterium HF10_25F10.;"
SCNpilot_cont_1000_bf_scaffold_874_curated_2
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(336..941)
DNA (606bp) protein (202aa)
gst9; hypothetical protein; K00799 glutathione S-transferase [EC:2.5.1.18]
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031E8265
Glutathione S-transferase {ECO:0000313|EMBL:KFL26230.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
SCNpilot_cont_1000_bf_scaffold_874_curated_3
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1079..1780)
DNA (702bp) protein (234aa)
Demethylmenaquinone methyltransferase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EU55_9RHIZ
Demethylmenaquinone methyltransferase {ECO:0000313|EMBL:CDX32712.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
demethylmenaquinone methyltransferase
SCNpilot_cont_1000_bf_scaffold_874_curated_4
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1817..2923)
DNA (1107bp) protein (369aa)
Mannonate dehydratase {ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|SAAS:SAAS00189414};; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
mannonate dehydratase (EC:4.2.1.8); K01686 mannonate dehydratase [EC:4.2.1.8]
UPI0003CE6B2A related cluster n=1 Tax=unknown RepID=UPI0003CE6B2A
SCNpilot_cont_1000_bf_scaffold_874_curated_5
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2933..3730)
DNA (798bp) protein (266aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YFJ6_9RHIZ
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EHH09475.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_1000_bf_scaffold_874_curated_6
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3737..4723)
DNA (987bp) protein (329aa)
Ribose ABC transporter, permease protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V1B8_9RHIZ
Putative ribose ABC transporter {ECO:0000313|EMBL:AHK46308.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
ribose transport system permease protein rbsC-like
SCNpilot_cont_1000_bf_scaffold_874_curated_7
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4720..6282)
DNA (1563bp) protein (521aa)
Ribose ABC transporter n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V700_9RHIZ
Sugar-transporting ATPase {ECO:0000313|EMBL:KDP76591.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
ribose import ATP-binding protein RbsA 1-like
SCNpilot_cont_1000_bf_scaffold_874_curated_8
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6288..7250)
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B4CDC8
Uncharacterized protein {ECO:0000313|EMBL:KDP76590.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
periplasmic binding protein/LacI transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_874_curated_9
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7247..7996)
DNA (750bp) protein (250aa)
Transcriptional regulator n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F3D1_9RHIZ
GntR domain protein {ECO:0000313|EMBL:CDX13109.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
GntR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_874_curated_10
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8163..9347
DNA (1185bp) protein (395aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
mannonate dehydratase (EC:4.2.1.8); K01686 mannonate dehydratase [EC:4.2.1.8]
Mannonate dehydratase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YFJ7_9RHIZ
SCNpilot_cont_1000_bf_scaffold_874_curated_11
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9351..10151)
DNA (801bp) protein (267aa)
Putative methyltransferase,S-Adenosyl-L-methionine (SAM)-MTase (EC:2.1.1.-)
Methyltransferase, S-adenosyl-L-methionine (SAM)-MTase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HUB9_9RHIZ
Methyltransferase type 11 {ECO:0000313|EMBL:CDX16568.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
SCNpilot_cont_1000_bf_scaffold_874_curated_12
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10447..11778
DNA (1332bp) protein (444aa)
Extracellular solute-binding protein family 1 n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TN69_MESCW
family 1 extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ADV11627.1}; Flags: Precursor;; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_1000_bf_scaffold_874_curated_13
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11854..12783
DNA (930bp) protein (310aa)
xylose isomerase domain-containing protein; K03335 inosose dehydratase [EC:4.2.1.44]
Xylose isomerase domain protein TIM barrel n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F6G0_9RHIZ
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:CCV12070.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
SCNpilot_cont_1000_bf_scaffold_874_curated_14
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12805..13713
DNA (909bp) protein (303aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FIV9_9RHIZ
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CCV12069.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein
SCNpilot_cont_1000_bf_scaffold_874_curated_15
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13713..14558
DNA (846bp) protein (282aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F7B4_9RHIZ
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CCV12068.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
binding-protein-dependent transport systems inner membrane component; K02026 multiple sugar transport system permease protein
SCNpilot_cont_1000_bf_scaffold_874_curated_16
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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14560..15639
DNA (1080bp) protein (360aa)
Oxidoreductase domain protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EQY3_9RHIZ
Oxidoreductase domain protein {ECO:0000313|EMBL:CDX29663.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
oxidoreductase domain-containing protein
SCNpilot_cont_1000_bf_scaffold_874_curated_17
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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15712..16767
DNA (1056bp) protein (352aa)
AP endonuclease n=1 Tax=Hoeflea sp. 108 RepID=UPI00035E7464
AP endonuclease {ECO:0000313|EMBL:KJC59597.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_874_curated_18
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16779..17954
DNA (1176bp) protein (392aa)
oxidoreductase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036C264B
Oxidoreductase {ECO:0000313|EMBL:KJC59598.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
putative oxidoreductase/dehydrogenase protein
SCNpilot_cont_1000_bf_scaffold_874_curated_19
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17996..18220
DNA (225bp) protein (75aa)
UPI0003CE04DD related cluster n=1 Tax=unknown RepID=UPI0003CE04DD
Fused maltose transport subunit, ATP-binding component of ABC superfamily regulatory protein {ECO:0000313|EMBL:CDX38647.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein; K10230 sorbitol/mannitol transport system ATP-binding protein
Displaying 19 items

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