ggKbase home page

SCNpilot_cont_1000_bf_scaffold_284_curated

Search features with annotation key words

Displaying items 1-30 of 292 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_284_curated_1
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..284)
DNA (282bp) protein (94aa)
Luciferase-like monooxygenase n=1 Tax=Klebsiella sp. OBRC7 RepID=J6IQL7_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:GAL56972.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
alkanal monooxygenase subunit alpha
SCNpilot_cont_1000_bf_scaffold_284_curated_2
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(424..1362)
DNA (939bp) protein (313aa)
Transcription regulator n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YKW3_9RHIZ
Transcription regulator {ECO:0000313|EMBL:EHH03478.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
AraC type helix-turn-helix-domain containing protein
SCNpilot_cont_1000_bf_scaffold_284_curated_3
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1451..2593
DNA (1143bp) protein (381aa)
Transcriptional regulator n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YKW2_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:CDX29792.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
transcriptional regulator rbh
SCNpilot_cont_1000_bf_scaffold_284_curated_4
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2766..3971
DNA (1206bp) protein (402aa)
Mlr9176 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q981Z1_RHILO
hypothetical protein rbh
Mlr9176 protein {ECO:0000313|EMBL:BAB54568.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_1000_bf_scaffold_284_curated_5
unknown

Not on your lists

comp(3988..4221)
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_284_curated_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4454..6244
DNA (1791bp) protein (597aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YFI8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX44588.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
putative flavoprotein involved in K+ transport
SCNpilot_cont_1000_bf_scaffold_284_curated_7
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6283..7521)
DNA (1239bp) protein (413aa)
Amidohydrolase 3; K01465 dihydroorotase [EC:3.5.2.3]
UPI0003CE42DF related cluster n=1 Tax=unknown RepID=UPI0003CE42DF
Dihydroorotase {ECO:0000313|EMBL:ESY62513.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
SCNpilot_cont_1000_bf_scaffold_284_curated_8
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7556..7921)
DNA (366bp) protein (122aa)
Endoribonuclease L-PSP n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8THR2_MESCW
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ADV10057.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_1000_bf_scaffold_284_curated_9
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8139..8624
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YDV4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX44580.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_284_curated_10
Mesorhizobium sp. L103C119B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8968..9222
DNA (255bp) protein (85aa)
UPI0003CE8440 related cluster n=1 Tax=unknown RepID=UPI0003CE8440
Uncharacterized protein {ECO:0000313|EMBL:ESZ69519.1}; TaxID=1287085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C119B0.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_284_curated_11
Mesorhizobium sp. LNJC391B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9256..10053
DNA (798bp) protein (266aa)
UPI0003CF72A5 related cluster n=2 Tax=unknown RepID=UPI0003CF72A5
Membrane protein {ECO:0000313|EMBL:ESY30624.1}; TaxID=1287273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC391B00.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_284_curated_12
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10173..10853
DNA (681bp) protein (227aa)
XRE family transcriptional regulator n=1 Tax=Rhizobium loti RepID=UPI0003771126
DNA-binding response regulator in two-component regulatory system with CusS {ECO:0000313|EMBL:CDX41518.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
two-component response regulator; K02483 two-component system, OmpR family, response regulator rbh
SCNpilot_cont_1000_bf_scaffold_284_curated_13
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10850..12229
DNA (1380bp) protein (460aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
Sensory histidine protein kinase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98E08_RHILO
sensory histidine protein kinase rbh
SCNpilot_cont_1000_bf_scaffold_284_curated_14
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12400..12996
DNA (597bp) protein (199aa)
Putative lipoprotein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98E07_RHILO
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:BAB51113.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_1000_bf_scaffold_284_curated_15
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12998..13660
DNA (663bp) protein (221aa)
ABC transporter ATP-binding protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98E06_RHILO
ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAB51114.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_1000_bf_scaffold_284_curated_16
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13653..14333
DNA (681bp) protein (227aa)
ABC transporter, ATP-binding protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98E05_RHILO
ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:BAB51115.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_1000_bf_scaffold_284_curated_17
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14333..16984
DNA (2652bp) protein (884aa)
ABC transporter integral membrane protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98E04_RHILO
ABC transporter; K02004 putative ABC transport system permease protein rbh
ABC transporter integral membrane protein {ECO:0000313|EMBL:BAB51116.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_1000_bf_scaffold_284_curated_18
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17074..17625)
DNA (552bp) protein (184aa)
Phosphoesterase PA-phosphatase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UXC8_9RHIZ
Phosphoesterase PA-phosphatase {ECO:0000313|EMBL:ENN85411.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
PA-phosphatase-like phosphoesterase
SCNpilot_cont_1000_bf_scaffold_284_curated_19
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17845..19476)
DNA (1632bp) protein (544aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI0003722258
Putative membrane protein {ECO:0000313|EMBL:AID33428.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
glycosyl transferase family protein
SCNpilot_cont_1000_bf_scaffold_284_curated_20
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19772..20200)
DNA (429bp) protein (143aa)
UPI0003CF4B35 related cluster n=1 Tax=unknown RepID=UPI0003CF4B35
AsnC family transcriptional regulator {ECO:0000313|EMBL:ESW88947.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_284_curated_21
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20321..21424
DNA (1104bp) protein (368aa)
UPI0003CE7BCC related cluster n=1 Tax=unknown RepID=UPI0003CE7BCC
Saccharopine dehydrogenase {ECO:0000313|EMBL:ESY76777.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
saccharopine dehydrogenase-like oxidoreductase
SCNpilot_cont_1000_bf_scaffold_284_curated_22
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21521..22918)
DNA (1398bp) protein (466aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
dihydrolipoamide dehydrogenase (EC:1.8.1.4); K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] rbh
Dihydrolipoyl dehydrogenase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YHS0_9RHIZ
SCNpilot_cont_1000_bf_scaffold_284_curated_23
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23185..24486)
DNA (1302bp) protein (434aa)
Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex {ECO:0000313|EMBL:CDX38329.1}; EC=2.3.1.168 {ECO:0000313|EMBL:CDX38329.1};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
Branched-chain alpha-keto acid dehydrogenase subunit E2 n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YHS1_9RHIZ
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component
SCNpilot_cont_1000_bf_scaffold_284_curated_24
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24489..25508)
DNA (1020bp) protein (340aa)
transketolase; K00167 2-oxoisovalerate dehydrogenase E1 component, beta subunit [EC:1.2.4.4]
UPI0003D02A16 related cluster n=1 Tax=unknown RepID=UPI0003D02A16
2-oxoisovalerate dehydrogenase subunit beta {ECO:0000313|EMBL:ESZ10402.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
SCNpilot_cont_1000_bf_scaffold_284_curated_25
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25514..26746)
DNA (1233bp) protein (411aa)
2-oxoisovalerate dehydrogenase subunit alpha {ECO:0000313|EMBL:CDX27665.1}; EC=1.2.4.4 {ECO:0000313|EMBL:CDX27665.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
3-methyl-2-oxobutanoate dehydrogenase (EC:1.2.4.4); K00166 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [EC:1.2.4.4]
2-oxoisovalerate dehydrogenase subunit alpha n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FEK6_9RHIZ
SCNpilot_cont_1000_bf_scaffold_284_curated_26
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27501..28541
DNA (1041bp) protein (347aa)
DNA polymerase III subunit delta; K02340 DNA polymerase III subunit delta [EC:2.7.7.7]
UPI0003CF385D related cluster n=1 Tax=unknown RepID=UPI0003CF385D
DNA polymerase III subunit delta {ECO:0000313|EMBL:ESY62605.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
SCNpilot_cont_1000_bf_scaffold_284_curated_27
unknown

Not on your lists

28909..29514
DNA (606bp) protein (202aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_284_curated_28
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29456..30160)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. AP16 RepID=J2DEZ2_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEA09049.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
SCNpilot_cont_1000_bf_scaffold_284_curated_29
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30365..30949
DNA (585bp) protein (195aa)
Regulatory protein TetR n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TK71_MESCW
TetR family transcriptional regulator
Regulatory protein TetR {ECO:0000313|EMBL:ADV11443.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_1000_bf_scaffold_284_curated_30
unknown

Not on your lists

31205..31411
DNA (207bp) protein (69aa)

This feature has no annotations

Displaying items 1-30 of 292 in total

View Taxonomy