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SCNpilot_cont_1000_bf_scaffold_62_curated

Search features with annotation key words

Displaying items 1-30 of 183 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_62_curated_1
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..659
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EXT0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV08813.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_62_curated_2
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

727..1521
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FEY1_9RHIZ
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein; K05810 conserved hypothetical protein
SCNpilot_cont_1000_bf_scaffold_62_curated_3
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1521..2672
DNA (1152bp) protein (384aa)
Xaa-Pro dipeptidase n=1 Tax=Rhizobium loti RepID=UPI00036B568A
Creatinase/Prolidase N-terminal domain protein {ECO:0000313|EMBL:AID32062.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hydrolase/peptidase rbh
SCNpilot_cont_1000_bf_scaffold_62_curated_4
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2680..3315
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TI58_MESCW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV11316.1}; Flags: Precursor;; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_1000_bf_scaffold_62_curated_5
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3541..4476
DNA (936bp) protein (312aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="M
PREDICTED: ribose-phosphate pyrophosphokinase 1, chloroplastic-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C17788
ribose-phosphate pyrophosphokinase
SCNpilot_cont_1000_bf_scaffold_62_curated_6
unknown

Not on your lists

comp(4638..5027)
DNA (390bp) protein (130aa)
Cytochrome C class I n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QJY7_9RHIZ
Cytochrome c2 {ECO:0000313|EMBL:CPR15986.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
cytochrome C class I; K08738 cytochrome c
SCNpilot_cont_1000_bf_scaffold_62_curated_7
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5221..6057)
DNA (837bp) protein (279aa)
AraC family transcriptional regulator n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FIQ7_9RHIZ
AraC family transcriptional regulator {ECO:0000313|EMBL:ESX78647.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
transcriptional regulator rbh
SCNpilot_cont_1000_bf_scaffold_62_curated_8
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6285..7514
DNA (1230bp) protein (410aa)
Fosmidomycin efflux system, member of the major facilitator superfamily n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EV18_9RHIZ
Fosmidomycin efflux system, member of the major facilitator superfamily {ECO:0000313|EMBL:CDX31444.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
arabinose efflux permease family protein
SCNpilot_cont_1000_bf_scaffold_62_curated_9
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7593..8492)
DNA (900bp) protein (300aa)
Gluconolactonase n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7ETS9_9RHIZ
SMP-30/Gluconolaconase/LRE domain protein {ECO:0000313|EMBL:CDX17696.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
SMP-30/Gluconolaconase/LRE domain-containing protein
SCNpilot_cont_1000_bf_scaffold_62_curated_10
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8600..9319
DNA (720bp) protein (240aa)
UPI0003CE00DB related cluster n=1 Tax=unknown RepID=UPI0003CE00DB
GntR domain protein {ECO:0000313|EMBL:CDX21637.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
GntR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_62_curated_11
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9321..10523
DNA (1203bp) protein (401aa)
Dehydratase n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7ETM7_9RHIZ
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:CDX31248.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
mandelate racemase/muconate lactonizing protein
SCNpilot_cont_1000_bf_scaffold_62_curated_12
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10547..11524
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y4J7_MESOW
Uncharacterized protein {ECO:0000313|EMBL:CDX62070.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_62_curated_13
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11605..12582
DNA (978bp) protein (326aa)
UPI0003CE59FF related cluster n=1 Tax=unknown RepID=UPI0003CE59FF
Inner-membrane translocator {ECO:0000313|EMBL:CDX31254.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
inner-membrane translocator; K02057 simple sugar transport system permease protein
SCNpilot_cont_1000_bf_scaffold_62_curated_14
Mesorhizobium sp. L2C085B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12587..13318
DNA (732bp) protein (244aa)
ABC transporter; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
UPI0003CE1086 related cluster n=1 Tax=unknown RepID=UPI0003CE1086
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESZ10559.1}; TaxID=1287117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C085B000.;"
SCNpilot_cont_1000_bf_scaffold_62_curated_15
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13381..14136
DNA (756bp) protein (252aa)
UPI0003CF16D7 related cluster n=1 Tax=unknown RepID=UPI0003CF16D7
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CDX17787.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_1000_bf_scaffold_62_curated_16
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14151..15023
DNA (873bp) protein (291aa)
Aldose 1-epimerase n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7EW24_9RHIZ
Aldose 1-epimerase {ECO:0000313|EMBL:CDX62077.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Aldose 1-epimerase
SCNpilot_cont_1000_bf_scaffold_62_curated_17
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


15337..15978
DNA (642bp) protein (214aa)
50S ribosomal protein L25 n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TI50_MESCW
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_1000_bf_scaffold_62_curated_18
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16003..16728
DNA (726bp) protein (242aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
Peptidyl-tRNA hydrolase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FIR2_9RHIZ
SCNpilot_cont_1000_bf_scaffold_62_curated_19
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16733..17296
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FJ43_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX78834.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
SCNpilot_cont_1000_bf_scaffold_62_curated_20
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17374..18477
DNA (1104bp) protein (368aa)
GTP-binding protein YchF n=1 Tax=Rhizobium loti RepID=UPI00036EC8BA
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
ychF; GTP-dependent nucleic acid-binding protein EngD; K06942 rbh
SCNpilot_cont_1000_bf_scaffold_62_curated_21
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18519..19064)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0AYQ3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EZQ16601.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_62_curated_22
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19190..20554)
DNA (1365bp) protein (455aa)
Guanine deaminase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KHZ5_MESAW
guanine deaminase
Guanine deaminase {ECO:0000313|EMBL:AGB44631.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_cont_1000_bf_scaffold_62_curated_23
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20691..22025
DNA (1335bp) protein (445aa)
UPI0003D00B49 related cluster n=1 Tax=unknown RepID=UPI0003D00B49
Xanthine/uracil permease {ECO:0000313|EMBL:ESZ28952.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
xanthine/uracil permease
SCNpilot_cont_1000_bf_scaffold_62_curated_24
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22403..23377
DNA (975bp) protein (325aa)
UPI0003CDF871 related cluster n=1 Tax=unknown RepID=UPI0003CDF871
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
magnesium and cobalt transport protein CorA; K03284 magnesium transporter
SCNpilot_cont_1000_bf_scaffold_62_curated_25
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23533..23994
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YAR5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX15923.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_62_curated_26
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23991..24461
DNA (471bp) protein (157aa)
MaoC domain-containing protein dehydratase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YAR6_9RHIZ
MaoC domain-containing protein dehydratase {ECO:0000313|EMBL:EHH11240.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
MaoC domain-containing protein dehydratase
SCNpilot_cont_1000_bf_scaffold_62_curated_27
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24596..25141)
DNA (546bp) protein (182aa)
adenine phosphoribosyltransferase (EC:2.4.2.7); K00759 adenine phosphoribosyltransferase [EC:2.4.2.7]
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
adenine phosphoribosyltransferase n=2 Tax=Rhizobium loti RepID=UPI00036BB0CC
SCNpilot_cont_1000_bf_scaffold_62_curated_28
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25208..25657)
DNA (450bp) protein (150aa)
Mll2702 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98HU9_RHILO
hypothetical protein
Mll2702 protein {ECO:0000313|EMBL:BAB49767.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_1000_bf_scaffold_62_curated_29
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25819..26676)
DNA (858bp) protein (286aa)
ribosomal protein P2 n=1 Tax=Rhizobium loti RepID=UPI00036CD114
Cytochrome c1-2, heme protein {ECO:0000313|EMBL:AID32082.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
cytochrome C1; K00413 ubiquinol-cytochrome c reductase cytochrome c1 subunit rbh
SCNpilot_cont_1000_bf_scaffold_62_curated_30
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26704..28005)
DNA (1302bp) protein (434aa)
Cytochrome b n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TI40_MESCW
cytochrome b/b6 domain; K00412 ubiquinol-cytochrome c reductase cytochrome b subunit
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
Displaying items 1-30 of 183 in total

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