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SCNpilot_cont_1000_bf_scaffold_640_curated

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_640_curated_1
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

521..2497
DNA (1977bp) protein (659aa)
Metalloendopeptidase-like membrane protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KGM3_MESAW
metalloendopeptidase-like membrane protein
Metalloendopeptidase-like membrane protein {ECO:0000313|EMBL:AGB44151.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_cont_1000_bf_scaffold_640_curated_2
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2514..4070)
DNA (1557bp) protein (519aa)
Transmembrane efflux protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F220_9RHIZ
Transmembrane efflux protein {ECO:0000313|EMBL:CCV11392.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
EmrB/QacA subfamily drug resistance transporter
SCNpilot_cont_1000_bf_scaffold_640_curated_3
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4351..5847)
DNA (1497bp) protein (499aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00037BF673
Ykud domain protein {ECO:0000313|EMBL:AID32635.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
ErfK/YbiS/YcfS/YnhG family protein
SCNpilot_cont_1000_bf_scaffold_640_curated_4
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6116..6472)
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YIV3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX47025.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_640_curated_5
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6597..9203)
DNA (2607bp) protein (869aa)
Protein disaggregation chaperone n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EM00_9RHIZ
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
endopeptidase Clp ATP-binding chain B, clpB; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB rbh
SCNpilot_cont_1000_bf_scaffold_640_curated_6
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9320..10267)
DNA (948bp) protein (316aa)
UPI0003CE025C related cluster n=1 Tax=unknown RepID=UPI0003CE025C
Uncharacterized protein {ECO:0000313|EMBL:ESW89786.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_640_curated_7
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10580..11449)
DNA (870bp) protein (290aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium
protein-(glutamine-N5) methyltransferase, release factor-specific; K02493 release factor glutamine methyltransferase [EC:2.1.1.-]
Release factor glutamine methyltransferase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YIV6_9RHIZ
SCNpilot_cont_1000_bf_scaffold_640_curated_8
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11442..12521)
DNA (1080bp) protein (360aa)
Peptide chain release factor 1 n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YIV7_9RHIZ
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1 rbh
SCNpilot_cont_1000_bf_scaffold_640_curated_9
Mesorhizobium sp. LSHC422A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12635..14905)
DNA (2271bp) protein (757aa)
Peptidase n=2 Tax=Mesorhizobium sp. LNJC380A00 RepID=V7GN00_9RHIZ
Peptidase {ECO:0000313|EMBL:ESX60237.1}; TaxID=1287294 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC422A00.;"
phosphoenolpyruvate-protein phosphotransferase
SCNpilot_cont_1000_bf_scaffold_640_curated_10
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14986..16239)
DNA (1254bp) protein (418aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
UPI0003CFD533 related cluster n=1 Tax=unknown RepID=UPI0003CFD533
aspartate kinase, monofunctional class
SCNpilot_cont_1000_bf_scaffold_640_curated_11
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16448..18670)
DNA (2223bp) protein (741aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YL19_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX47033.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_640_curated_12
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18867..19616
DNA (750bp) protein (250aa)
ubiquinone biosynthesis O-methyltransferase (EC:2.1.1.64)
UPI0003CE2A0F related cluster n=1 Tax=unknown RepID=UPI0003CE2A0F
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472, ECO:0000256|SAAS:SAAS00063564}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiquinone 3-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
SCNpilot_cont_1000_bf_scaffold_640_curated_13
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19677..20180)
DNA (504bp) protein (168aa)
Mll3444 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98G86_RHILO
hypothetical protein rbh
Mll3444 protein {ECO:0000313|EMBL:BAB50330.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_1000_bf_scaffold_640_curated_14
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20196..21320)
DNA (1125bp) protein (375aa)
Mll3445 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98G85_RHILO
hypothetical protein rbh
Mll3445 protein {ECO:0000313|EMBL:BAB50331.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_1000_bf_scaffold_640_curated_15
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21429..22031
DNA (603bp) protein (201aa)
Mlr3446 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98G84_RHILO
hypothetical protein rbh
Mlr3446 protein {ECO:0000313|EMBL:BAB50332.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_1000_bf_scaffold_640_curated_16
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22094..22984)
DNA (891bp) protein (297aa)
UPI0003CEA684 related cluster n=1 Tax=unknown RepID=UPI0003CEA684
EamA-like transporter family
Transporter {ECO:0000313|EMBL:ESY98032.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
SCNpilot_cont_1000_bf_scaffold_640_curated_17
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23084..23569
DNA (486bp) protein (162aa)
MarR family transcriptional regulator n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y3L3_9RHIZ
MarR family transcriptional regulator {ECO:0000313|EMBL:ESZ22089.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
MarR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_640_curated_18
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23606..24082)
DNA (477bp) protein (159aa)
Putative transcriptional regulator, MarR family n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PSX1_9RHIZ
MarR family transcriptional regulator protein {ECO:0000313|EMBL:AIC27185.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
putative transcriptional regulator, MarR family
SCNpilot_cont_1000_bf_scaffold_640_curated_19
Phaeobacter gallaeciensis, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24270..25430
DNA (1161bp) protein (387aa)
hypothetical protein n=1 Tax=Herbaspirillum seropedicae RepID=UPI0002DA351D
oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:AFO88386.1}; TaxID=383629 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="Phaeobacter gallaeciensis (strain 2.10) (Roseobacter gallaeciensis).;"
SCNpilot_cont_1000_bf_scaffold_640_curated_20
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25455..25880)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KGK8_MESAW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB44136.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_cont_1000_bf_scaffold_640_curated_21
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25877..26737)
DNA (861bp) protein (287aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F212_9RHIZ
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:CCV11377.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
nitrilase, nitrilase 1 like protein rbh
SCNpilot_cont_1000_bf_scaffold_640_curated_22
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26749..27015)
DNA (267bp) protein (89aa)
UPI0003CE27CF related cluster n=1 Tax=unknown RepID=UPI0003CE27CF
Glutaredoxin 3 {ECO:0000313|EMBL:CDX49291.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Glutaredoxin, GrxC family
SCNpilot_cont_1000_bf_scaffold_640_curated_23
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27043..27861)
DNA (819bp) protein (273aa)
UPI0003CFC756 related cluster n=1 Tax=unknown RepID=UPI0003CFC756
Amidophosphoribosyltransferase {ECO:0000313|EMBL:ESZ22083.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
phosphoribosyltransferase
SCNpilot_cont_1000_bf_scaffold_640_curated_24
Mesorhizobium sp. LNJC386A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27913..28785
DNA (873bp) protein (291aa)
SAM-dependent methyltransferase n=1 Tax=Mesorhizobium sp. LNJC380A00 RepID=V7GKS9_9RHIZ
SAM-dependent methyltransferase {ECO:0000313|EMBL:ESY34096.1}; TaxID=1287270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC386A00.;"
type 11 methyltransferase
SCNpilot_cont_1000_bf_scaffold_640_curated_25
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28816..28998)
DNA (183bp) protein (61aa)
UPI0003CE072E related cluster n=1 Tax=unknown RepID=UPI0003CE072E
PilA {ECO:0000313|EMBL:ESW82563.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
Flp pilus assembly protein, pilin Flp
SCNpilot_cont_1000_bf_scaffold_640_curated_26
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29092..29397)
DNA (306bp) protein (102aa)
Mll3458 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98G75_RHILO
hypothetical protein
Mll3458 protein {ECO:0000313|EMBL:BAB50341.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_1000_bf_scaffold_640_curated_27
Mesorhizobium sp. L103C565B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29536..29955)
DNA (420bp) protein (140aa)
NTP pyrophosphohydrolase n=3 Tax=Mesorhizobium RepID=V7F018_9RHIZ
NTP pyrophosphohydrolase {ECO:0000313|EMBL:ESZ45604.1}; TaxID=1287094 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C565B0.;"
mutator MutT protein
SCNpilot_cont_1000_bf_scaffold_640_curated_28
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29952..30722)
DNA (771bp) protein (257aa)
UPI0003CF620B related cluster n=1 Tax=unknown RepID=UPI0003CF620B
Acetyltransferase {ECO:0000313|EMBL:ESY96567.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
acetyltransferase
SCNpilot_cont_1000_bf_scaffold_640_curated_29
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30734..31975)
DNA (1242bp) protein (414aa)
argJ; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase (EC:2.3.1.1 2.3.1.35); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] rbh
UPI0003CDD0AB related cluster n=1 Tax=unknown RepID=UPI0003CDD0AB
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
SCNpilot_cont_1000_bf_scaffold_640_curated_30
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32091..32336)
DNA (246bp) protein (82aa)
UPI0003CDFC92 related cluster n=1 Tax=unknown RepID=UPI0003CDFC92
AfpU {ECO:0000313|EMBL:ESW82557.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
Displaying items 1-30 of 51 in total

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